Evidence map›Paper›PMID 18714374›Full record

ArticlePloS one2008

A Drosophila Smyd4 homologue is a muscle-specific transcriptional modulator involved in development.

Elizabeth C Thompson, Andrew A Travers

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Testing the kinship theory of intragenomic conflict in honey bees (Apis mellifera).Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  15. Article
  16. Structure and function of SET and MYND domain-containing proteins.International journal of molecular sciences · 2015
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Elizabeth C ThompsonCell Biology, MRC Laboratory of Molecular Biology, Cambridge, United Kingdom. ect26@mrc-lmb.cam.ac.uk
Andrew A Travers
MRC Laboratory for Molecular Cell Biology · GB

Funding

Medical Research Council MC_U105184288
6 · The paper itself

Abstract

backgroundSET and MYND domain (Smyd) proteins are involved in the transcriptional regulation of cellular proliferation and development in vertebrates. However, the in vivo functions and mechanisms by which these proteins act are poorly understood. METHODOLOGY/PRINCIPAL

findingsWe have used biochemical and genetic approaches to study the role of a Smyd protein in Drosophila. We identified eleven Drosophila genes that encode Smyd proteins. CG14122 encodes a Smyd4 homologue that we have named dSmyd4. dSmyd4 repressed transcription and recruited class I histone deacetylases (HDACs). A region of dSmyd4 including the MYND domain interacted directly with approximately 150 amino acids at the N-termini of dHDAC1 and dHDAC3. dSmyd4 interacts selectively with Ebi, a component of the dHDAC3/SMRTER co-repressor complex. During embryogenesis dSmyd4 was expressed throughout the mesoderm, with highest levels in the somatic musculature. Muscle-specific RNAi against dSmyd4 resulted in depletion of the protein and lead to severe lethality. Eclosion is the final moulting stage of Drosophila development when adult flies escape from the pupal case. 80% of dSmyd4 knockdown flies were not able to eclose, resulting in late pupal lethality. However, many aspects of eclosion were still able to occur normally, indicating that dSmyd4 is likely to be involved in the development or function of adult muscle. CONCLUSIONS/SIGNIFICANCE: Repression of transcription by dSmyd4 and the involvement of this protein in development suggests that aspects of Smyd protein function are conserved between vertebrates and invertebrates.

Indexed as

Gene Expression RegulationTranscription, GeneticAnimalsCell Culture TechniquesCloning, MolecularConserved SequenceDNA-Binding ProteinsDrosophilaDrosophila ProteinsGenes, ReporterGlutathione TransferaseHistone DeacetylasesHistone-Lysine N-MethyltransferaseHumansMuscle ProteinsTranscription FactorsDNA-Binding ProteinsDrosophila ProteinsGlutathione TransferaseHistone DeacetylasesHistone-Lysine N-MethyltransferaseMuscle ProteinsSMYD3 protein, humanSmyd4 protein, DrosophilaTranscription Factors

Identifiers

PMID18714374
PMCPMC2500188
OpenAlexW1979910820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.