Evidence map›Paper›PMID 18713834›Full record

ArticleJournal of cell science2008

Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2(alpha) phosphorylation at Thr169.

Susanne Kramer, Rafael Queiroz, Louise Ellis, Helena Webb, Jörg D Hoheisel, Christine Clayton, Mark Carrington

Open access · greenAbstract read
In one paragraph

Article in Journal of cell science, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 158 citations in OpenAlex.

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  15. Finding Correlations Between mRNA and Protein Levels inFrontiers in cellular and infection microbiology · 2022
    Review
  16. Article
  17. Article
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  19. Review
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40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Susanne KramerDepartment of Biochemistry, University of Cambridge, Cambridge CB2 1GA, UK.
Rafael Queiroz
Louise Ellis
Helena Webb
Jörg D Hoheisel
Christine Clayton
Mark Carrington
University of Cambridge · GBGerman Cancer Research Center · DEDKFZ-ZMBH Alliance · DE

Funding

Wellcome Trust 076935
6 · The paper itself

Abstract

In trypanosomes there is an almost total reliance on post-transcriptional mechanisms to alter gene expression; here, heat shock was used to investigate the response to an environmental signal. Heat shock rapidly and reversibly induced a decrease in polysome abundance, and the consequent changes in mRNA metabolism were studied. Both heat shock and polysome dissociation were necessary for (1) a reduction in mRNA levels that was more rapid than normal turnover, (2) an increased number of P-body-like granules that contained DHH1, SCD6 and XRNA, (3) the formation of stress granules that remained largely separate from the P-body-like granules and localise to the periphery of the cell and, (4) an increase in the size of a novel focus located at the posterior pole of the cell that contain XRNA, but neither DHH1 nor SCD6. The response differed from mammalian cells in that neither the decrease in polysomes nor stress-granule formation required phosphorylation of eIF2alpha at the position homologous to that of serine 51 in mammalian eIF2alpha and in the occurrence of a novel XRNA-focus.

Indexed as

Trypanosoma brucei bruceiAnimalsCytoplasmic GranulesDNA DamageEukaryotic Initiation Factor-2Gene Expression RegulationHeat-Shock ResponseMicroarray AnalysisPolyribosomesProtein BiosynthesisProtozoan ProteinsRecombinant Fusion ProteinsRNA, MessengerThreonineEukaryotic Initiation Factor-2Protozoan ProteinsRecombinant Fusion ProteinsRNA, MessengerThreonine

Identifiers

PMID18713834
PMCPMC2871294
OpenAlexW181468314

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.