Evidence map›Paper›PMID 18713730›Full record

ArticleThe Journal of biological chemistry2008

The single subunit transmembrane E3 ligase gene related to anergy in lymphocytes (GRAIL) captures and then ubiquitinates transmembrane proteins across the cell membrane.

Neil Lineberry, Leon Su, Luis Soares, C Garrison Fathman

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The association ofArchives animal breeding · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Tetraspanins in the regulation of mast cell function.Medical microbiology and immunology · 2020
    Review
  13. Article
  14. Structure, dynamics and immunogenicity of a catalytically inactive CComputational and structural biotechnology journal · 2020
    Article
  15. Review
  16. Ubiquitin Ligase RNF138 Promotes Episodic Ataxia Type 2-Associated Aberrant Degradation of Human CaThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  17. Tetraspanins Function as Regulators of Cellular Signaling.Frontiers in cell and developmental biology · 2017
    Review
  18. Article
  19. TM4SF3 and AR: A Nuclear Complex that Stabilizes Both Proteins.Molecular endocrinology (Baltimore, Md.) · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Neil LineberryDepartment of Medicine, Division of Immunology and Rheumatology, Stanford University School of Medicine, Stanford, California 94305, USA.
Leon Su
Luis Soares
C Garrison Fathman
Stanford University · US

Funding

MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
TERNARY COMPLEX THAT DRIVES T-CELL ACTIVATIONR01CA065237 · NCI · STANFORD UNIVERSITY · PI FATHMAN, CHARLES GARRISON · 1994 to 2013
$3.2M
NCI NIH HHS CA 65237-17NIAID NIH HHS T32 AI007290NIAID NIH HHS T32-AI07290-21
6 · The paper itself

Abstract

The ubiquitin E3 ligase gene related to anergy in lymphocytes (GRAIL) (Rnf128) is a type 1 transmembrane protein that induces T cell anergy through the ubiquitination activity of its cytosolic RING finger. GRAIL also contains an equally large luminal region consisting primarily of an uncharacterized protease-associated (PA) domain. Using two-hybrid technology to screen for proteins that bound the PA domain we identified CD151, a member of the tetraspanin family of membrane proteins. GRAIL bound to the luminal/extracellular portion of both CD151 and the related tetraspanin CD81 using its PA domain, which promoted ubiquitination of cytosolic lysine residues. GRAIL exhibited specificity for lysines only within the tetraspanin amino terminus even in the presence of other cytosolic lysine residues in the substrate. GRAIL-mediated ubiquitination promoted proteasomal degradation and cell surface down-regulation of tetraspanins via Lys-48 linkages. As a result, the juxtaposition of PA and RING finger domains across a lipid bilayer facilitates the capture of transmembrane substrates for subsequent ubiquitination. These findings identify for the first time a single subunit E3 ligase containing a substrate-binding domain spatially restricted by a membrane from its E2 recruitment domain as well as an E3 ligase for members of the tetraspanin family.

Indexed as

Amino Acid SequenceAntigens, CDCell MembraneCytosolHumansLymphocytesMolecular Sequence DataMutagenesis, Site-DirectedProtein Structure, TertiarySequence Homology, Amino AcidTetraspanin 24Tetraspanin 28Two-Hybrid System TechniquesUbiquitinUbiquitin-Protein LigasesAntigens, CDCD151 protein, humanCD81 protein, humanRNF128 protein, humanTetraspanin 24Tetraspanin 28UbiquitinUbiquitin-Protein Ligases

Identifiers

PMID18713730
PMCPMC2568916
OpenAlexW1996982253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.