Evidence map›Paper›PMID 18702525›Full record

ArticleBiochemistry2008

Solution structure of the iron-sulfur cluster cochaperone HscB and its binding surface for the iron-sulfur assembly scaffold protein IscU.

Anna K Füzéry, Marco Tonelli, Dennis T Ta, Gabriel Cornilescu, Larry E Vickery, John L Markley

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. The NMR contribution to protein-protein networking in Fe-S protein maturation.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  6. Molecular chaperones involved in mitochondrial iron-sulfur protein biogenesis.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  7. Review
  8. Review
  9. A New Tessera into the Interactome of theFrontiers in molecular biosciences · 2016
    Article
  10. Functional implications of the interaction between HscB and IscU in the biosynthesis of FeS clusters.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2015
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Structural basis for the mutual antagonism of cAMP and TRIP8b in regulating HCN channel function.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. Article
  17. Article
  18. An introduction to biological NMR spectroscopy.Molecular & cellular proteomics : MCP · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Anna K FüzéryDepartment of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706, USA.
Marco Tonelli
Dennis T Ta
Gabriel Cornilescu
Larry E Vickery
John L Markley
University of California, Irvine · USUniversity of Wisconsin–Madison · US

Funding

WATER DISTRIB:PHYSICAL PROPERT:PIZZA &LMPS MOZZARELLA CHEESES:EARLY STAGE MATURP41RR002301 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI KEUTSCH, FRANK · 1985 to 2011
$13.0M
900 MHz NMR Spectrometer Biomolecular InvestigationsP41GM066326 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN L · 2002 to 2006
$5.0M
NMR SPECTROSCOPY OF IRON-SULFUR PROTEINSR01GM058667 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 1999 to 2010
$2.7M
NCRR NIH HHS P41 RR002301NCRR NIH HHS P41 RR02301NIGMS NIH HHS GM54264NIGMS NIH HHS GM58667NIGMS NIH HHS P41 GM66326NIGMS NIH HHS R01 GM058667
6 · The paper itself

Abstract

The interaction between IscU and HscB is critical for successful assembly of iron-sulfur clusters. NMR experiments were performed on HscB to investigate which of its residues might be part of the IscU binding surface. Residual dipolar couplings ( (1) D HN and (1) D CalphaHalpha) indicated that the crystal structure of HscB [Cupp-Vickery, J. R., and Vickery, L. E. (2000) Crystal structure of Hsc20, a J-type cochaperone from Escherichia coli, J. Mol. Biol. 304, 835-845] faithfully represents its solution state. NMR relaxation rates ( (15)N R 1, R 2) and (1)H- (15)N heteronuclear NOE values indicated that HscB is rigid along its entire backbone except for three short regions which exhibit flexibility on a fast time scale. Changes in the NMR spectrum of HscB upon addition of IscU mapped to the J-domain/C-domain interface, the interdomain linker, and the C-domain. Sequence conservation is low in the interface and in the linker, and NMR changes observed for these residues likely result from indirect effects of IscU binding. NMR changes observed in the conserved patch of residues in the C-domain (L92, M93, L96, E97, E100, E104, and F153) were suggestive of a direct interaction with IscU. To test this, we replaced several of these residues with alanine and assayed for the ability of HscB to interact with IscU and to stimulate HscA ATPase activity. HscB(L92A,M93A,F153A) and HscB(E97A,E100A,E104A) both showed decreased binding affinity for IscU; the (L92A,M93A,F153A) substitution also strongly perturbed the allosteric interaction within the HscA.IscU.HscB ternary complex. We propose that the conserved patch in the C-domain of HscB is the principal binding site for IscU.

Indexed as

Amino Acid SubstitutionBinding SitesEscherichia coliEscherichia coli ProteinsHeat-Shock ProteinsHSP70 Heat-Shock ProteinsIronIron-Sulfur ProteinsMolecular ChaperonesMutation, MissenseNuclear Magnetic Resonance, BiomolecularProtein BindingProtein Structure, QuaternaryProtein Structure, TertiarySulfurEscherichia coli ProteinsHeat-Shock ProteinshscA protein, E coliHscB protein, E coliHSP70 Heat-Shock ProteinsIronIron-Sulfur ProteinsIscU protein, E coliMolecular ChaperonesSulfur

Identifiers

PMID18702525
PMCPMC2627783
OpenAlexW2009896370

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.