Evidence map›Paper›PMID 18701507›Full record

ArticleCancer research2008

Role of hMOF-dependent histone H4 lysine 16 acetylation in the maintenance of TMS1/ASC gene activity.

Priya Kapoor-Vazirani, Jacob D Kagey, Doris R Powell, Paula M Vertino

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 83 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Priya Kapoor-VaziraniDepartment of Radiation Oncology and the Winship Cancer Institute, Emory University, Atlanta, Georgia 30322, USA.
Jacob D Kagey
Doris R Powell
Paula M Vertino
Emory University · US

Funding

GENESIS AND CONSEQUENCES OF ABERRANT DNA METHYLATIONR01CA077337 · NCI · EMORY UNIVERSITY · PI VERTINO, PAULA M. · 1998 to 2016
$3.4M
Defining Genomic Signatures for Aberrant DNA Methylation in Human CancersR01CA132065 · NCI · EMORY UNIVERSITY · PI VERTINO, PAULA M. · 2009 to 2013
$1.5M
NCI NIH HHS 2R01-CA077337NCI NIH HHS R01 CA077337NCI NIH HHS R01 CA132065
6 · The paper itself

Abstract

Epigenetic silencing of tumor suppressor genes in human cancers is associated with aberrant methylation of promoter region CpG islands and local alterations in histone modifications. However, the mechanisms that drive these events remain unclear. Here, we establish an important role for histone H4 lysine 16 acetylation (H4K16Ac) and the histone acetyltransferase hMOF in the regulation of TMS1/ASC, a proapoptotic gene that undergoes epigenetic silencing in human cancers. In the unmethylated and active state, the TMS1 CpG island is spanned by positioned nucleosomes and marked by histone H3K4 methylation. H4K16Ac was uniquely localized to two sharp peaks that flanked the unmethylated CpG island and corresponded to strongly positioned nucleosomes. Aberrant methylation and silencing of TMS1 was accompanied by loss of the H4K16Ac peaks, loss of nucleosome positioning, hypomethylation of H3K4, and hypermethylation of H3K9. In addition, a single peak of histone H4 lysine 20 trimethylation was observed near the transcription start site. Down-regulation of hMOF or another component of the MSL complex resulted in a gene-specific decrease in H4K16Ac, loss of nucleosome positioning, and silencing of TMS1. Gene silencing induced by H4K16 deacetylation occurred independently of changes in histone methylation and DNA methylation and was reversed on hMOF reexpression. These results indicate that the selective marking of nucleosomes flanking the CpG island by hMOF is required to maintain TMS1 gene activity and suggest that the loss of H4K16Ac, mobilization of nucleosomes, and transcriptional down-regulation may be important events in the epigenetic silencing of certain tumor suppressor genes in cancer.

Indexed as

Gene Expression Regulation, NeoplasticAcetylationAntigens, CDApoptosisBlotting, WesternBreast NeoplasmsCadherinsCARD Signaling Adaptor ProteinsCells, CulturedChromatin ImmunoprecipitationCpG IslandsCytoskeletal ProteinsEpigenesis, GeneticEstrogen Receptor alphaFibroblastsHistone AcetyltransferasesAntigens, CDCadherinsCARD Signaling Adaptor ProteinsCDH1 protein, humanCytoskeletal ProteinsESR1 protein, humanEstrogen Receptor alphaHistone AcetyltransferasesHistonesKAT8 protein, humanLysineNucleosomesPYCARD protein, humanRNA, Small Interfering

Identifiers

PMID18701507
PMCPMC2585755
OpenAlexW2074400616

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.