Evidence map›Paper›PMID 18700816›Full record

ArticlePLoS biology2008

Retinoblastoma and its binding partner MSI1 control imprinting in Arabidopsis.

Pauline E Jullien, Assaf Mosquna, Mathieu Ingouff, Tadashi Sakata, Nir Ohad, Frédéric Berger

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 243 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Revisiting the female germline cell development.Frontiers in plant science · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Pauline E JullienChromatin and Reproduction Group, Temasek Life Sciences Laboratory, National University of Singapore, Singapore, Republic of Singapore.
Assaf Mosquna
Mathieu Ingouff
Tadashi Sakata
Nir Ohad
Frédéric Berger
Temasek Life Sciences Laboratory · SGTel Aviv University · ILNational University of Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parental genomic imprinting causes preferential expression of one of the two parental alleles. In mammals, differential sex-dependent deposition of silencing DNA methylation marks during gametogenesis initiates a new cycle of imprinting. Parental genomic imprinting has been detected in plants and relies on DNA methylation by the methyltransferase MET1. However, in contrast to mammals, plant imprints are created by differential removal of silencing marks during gametogenesis. In Arabidopsis, DNA demethylation is mediated by the DNA glycosylase DEMETER (DME) causing activation of imprinted genes at the end of female gametogenesis. On the basis of genetic interactions, we show that in addition to DME, the plant homologs of the human Retinoblastoma (Rb) and its binding partner RbAp48 are required for the activation of the imprinted genes FIS2 and FWA. This Rb-dependent activation is mediated by direct transcriptional repression of MET1 during female gametogenesis. We have thus identified a new mechanism required for imprinting establishment, outlining a new role for the Retinoblastoma pathway, which may be conserved in mammals.

Indexed as

Genomic ImprintingArabidopsisArabidopsis ProteinsDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDown-RegulationEpigenesis, GeneticGametogenesisGene Expression Regulation, PlantHomeodomain ProteinsHumansN-Glycosyl HydrolasesPromoter Regions, GeneticProtein BindingRetinoblastoma ProteinTrans-ActivatorsArabidopsis ProteinsDEMETER protein, ArabidopsisDNA (Cytosine-5-)-MethyltransferasesFIS2 protein, ArabidopsisFWA protein, ArabidopsisHomeodomain ProteinsMEA protein, ArabidopsisMET1 protein, ArabidopsisMSI1 protein, ArabidopsisN-Glycosyl HydrolasesRBR1 protein, ArabidopsisRetinoblastoma ProteinTrans-ActivatorsTranscription Factors

Identifiers

PMID18700816
PMCPMC2504488
OpenAlexW2094814397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.