Evidence map›Paper›PMID 18694511›Full record

ArticleBMC molecular biology2008

Analysis of the piggyBac transposase reveals a functional nuclear targeting signal in the 94 c-terminal residues.

James H Keith, Tresa S Fraser, Malcolm J Fraser

Open access · hybridAbstract read
In one paragraph

Article in BMC molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Functional Characterization of the N-Terminal Disordered Region of theInternational journal of molecular sciences · 2022
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  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

James H KeithUniversity of Notre Dame, Notre Dame, Indiana, USA. jkeith2@nd.edu
Tresa S Fraser
Malcolm J Fraser
University of Notre Dame · US

Funding

Transgenic engineering of Aedine mosquitoesR01AI048561 · NIAID · UNIVERSITY OF NOTRE DAME · PI FRASER, MALCOLM J. · 2001 to 2005
$1.8M
NIAID NIH HHS R01 AI048561NIAID NIH HHS R01 AI48561
6 · The paper itself

Abstract

backgroundThe piggyBac transposable element is a popular tool for germ-line transgenesis of eukaryotes. Despite this, little is known about the mechanism of transposition or the transposase (TPase) itself. A thorough understanding of just how piggyBac works may lead to more effective use of this important mobile element. A PSORTII analysis of the TPase amino acid sequence predicts a bipartite nuclear localization signal (NLS) near the c-terminus, just upstream of a putative ZnF (ZnF).

resultsWe fused the piggyBac TPase upstream of and in-frame with the enhanced yellow fluorescent protein (EYFP) in the Drosophila melanogaster inducible metallothionein protein. Using Drosophila Schneider 2 (S2) cells and the deep red fluorescent nuclear stain Draq5, we were able to track the pattern of piggyBac localization with a scanning confocal microscope 48 hours after induction with copper sulphate.

conclusionThrough n and c-terminal truncations, targeted internal deletions, and specific amino acid mutations of the piggyBac TPase open reading frame, we found that not only is the PSORTII-predicted NLS required for the TPase to enter the nucleus of S2 cells, but there are additional requirements for negatively charged amino acids a short length upstream of this region for nuclear localization.

Indexed as

Active Transport, Cell NucleusAmino Acid SequenceAnimalsAnthraquinonesCells, CulturedDNA Transposable ElementsDrosophila melanogasterLuminescent ProteinsMicroscopy, ConfocalMutagenesis, Site-DirectedNuclear Localization SignalsTransposases1,5-bis((2-(methylamino)ethyl)amino)-4,8-dihydroxyanthracene-9,10-dioneAnthraquinonesDNA Transposable ElementsLuminescent ProteinsNuclear Localization SignalsTransposases

Identifiers

PMID18694511
PMCPMC2532691
OpenAlexW2068121014

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.