Evidence map›Paper›PMID 18694491›Full record

ArticleBMC genetics2008

Genetic variation in a member of the laminin gene family affects variation in body composition in Drosophila and humans.

Maria De Luca, Michelle Moses Chambers, Krista Casazza, Kerry H Lok, Gary R Hunter, Barbara A Gower, José R Fernández

Open access · diamondAbstract readComparative Study
In one paragraph

Article in BMC genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Maria De LucaDepartment of Nutrition Sciences, School of Health Professions, University of Alabama at Birmingham, 3rd Avenue South, Birmingham, AL 35294-3360, USA. mdeluca2@uab.edu
Michelle Moses Chambers
Krista Casazza
Kerry H Lok
Gary R Hunter
Barbara A Gower
José R Fernández
University of Alabama at Birmingham · US

Funding

Why is the prevalence of obesity so high in U.S. Southern States? Regional predictors of BMI and obesity treatment response.P30DK056336 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI James O Hill · 2000 to 2026
$31.9M
Zevalin Radioimmunotherapy Using a Modified TreatmentM01RR000032 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI RICH, ROBERT R. · 1985 to 2008
$23.6M
EXERCISE TRAINING IN OBESITY-PRONE BLACK AND WHITE WOMENR01DK049779 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GOWER, BARBARA A, HUNTER, GARY R · 1995 to 2013
$4.4M
QTL mapping age-related changes in lipid storageR01HL080812 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DE LUCA, MARIA · 2004 to 2007
$1.3M
NCRR NIH HHS M01 RR000032NCRR NIH HHS M01RR00032NHLBI NIH HHS R01 HL080812NHLBI NIH HHS R01HL80812NIDDK NIH HHS P30 DK056336NIDDK NIH HHS P30DK56336NIDDK NIH HHS R01 DK049779NIDDK NIH HHS R01DK49779NIDDK NIH HHS R01DK51694
6 · The paper itself

Abstract

backgroundThe objective of the present study was to map candidate loci influencing naturally occurring variation in triacylglycerol (TAG) storage using quantitative complementation procedures in Drosophila melanogaster. Based on our results from Drosophila, we performed a human population-based association study to investigate the effect of natural variation in LAMA5 gene on body composition in humans.

resultsWe identified four candidate genes that contributed to differences in TAG storage between two strains of D. melanogaster, including Laminin A (LanA), which is a member of the alpha subfamily of laminin chains. We confirmed the effects of this gene using a viable LanA mutant and showed that female flies homozygous for the mutation had significantly lower TAG storage, body weight, and total protein content than control flies. Drosophila LanA is closely related to human LAMA5 gene, which maps to the well-replicated obesity-linkage region on chromosome 20q13.2-q13.3. We tested for association between three common single nucleotide polymorphisms (SNPs) in the human LAMA5 gene and variation in body composition and lipid profile traits in a cohort of unrelated women of European American (EA) and African American (AA) descent. In both ethnic groups, we found that SNP rs659822 was associated with weight (EA: P = 0.008; AA: P = 0.05) and lean mass (EA: P= 0.003; AA: P = 0.03). We also found this SNP to be associated with height (P = 0.01), total fat mass (P = 0.01), and HDL-cholesterol (P = 0.003) but only in EA women. Finally, significant associations of SNP rs944895 with serum TAG levels (P = 0.02) and HDL-cholesterol (P = 0.03) were observed in AA women.

conclusionOur results suggest an evolutionarily conserved role of a member of the laminin gene family in contributing to variation in weight and body composition.

Indexed as

Genetic VariationQuantitative Trait, HeritableAllelesAnimalsBlack or African AmericanBody CompositionDrosophila melanogasterFemaleGene FrequencyGenotypeHumansLamininPolymorphism, Single NucleotideQuantitative Trait LociSpecies SpecificityTriglyceridesLamininlaminin Alaminin alpha5Triglycerides

Identifiers

PMID18694491
PMCPMC2533007
OpenAlexW2148551732

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.