Evidence map›Paper›PMID 18694482›Full record

ArticleBMC biotechnology2008

Plasmid selection in Escherichia coli using an endogenous essential gene marker.

Shan Goh, Liam Good

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 62 citations in OpenAlex.

  1. Review
  2. Review
  3. Live attenuated-nonpathogenicFrontiers in microbiology · 2024
    Review
  4. Article
  5. RecombinantAntibiotics (Basel, Switzerland) · 2022
    Review
  6. Construction of aHeliyon · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. An integrated biotechnology platform for developing sustainable chemical processes.Journal of industrial microbiology & biotechnology · 2015
    Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Shan GohDepartment of Cell and Molecular Biology, Karolinska Institute, Stockholm, SE-17177, Sweden. shan.goh@ki.se
Liam Good
Karolinska Institutet · SERoyal Veterinary College · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAntibiotic resistance genes are widely used for selection of recombinant bacteria, but their use risks contributing to the spread of antibiotic resistance. In particular, the practice is inappropriate for some intrinsically resistant bacteria and in vaccine production, and costly for industrial scale production. Non-antibiotic systems are available, but require mutant host strains, defined media or expensive reagents. An unexplored concept is over-expression of a host essential gene to enable selection in the presence of a chemical inhibitor of the gene product. To test this idea in E. coli, we used the growth essential target gene fabI as the plasmid-borne marker and the biocide triclosan as the selective agent.

resultsThe new cloning vector, pFab, enabled selection by triclosan at 1 microM. Interestingly, pFab out-performed the parent pUC19-ampicillin system in cell growth, plasmid stability and plasmid yield. Also, pFab was toxic to host cells in a way that was reversed by triclosan. Therefore, pFab and triclosan are toxic when used alone but in combination they enhance growth and plasmid production through a gene-inhibitor interaction.

conclusionThe fabI-triclosan model system provides an alternative plasmid selection method based on essential gene over-expression, without the use of antibiotic-resistance genes and conventional antibiotics.

Indexed as

PlasmidsSelection, GeneticAnti-Bacterial AgentsDNA, BacterialDrug Resistance, BacterialEnoyl-(Acyl-Carrier-Protein) Reductase (NADH)Escherichia coliEscherichia coli ProteinsFatty Acid Synthase, Type IIGene Expression Regulation, BacterialGenes, BacterialGenes, EssentialGenetic VectorsMicrobial ViabilityTransformation, BacterialTriclosanAnti-Bacterial AgentsDNA, BacterialEnoyl-(Acyl-Carrier-Protein) Reductase (NADH)Escherichia coli ProteinsfabI protein, E coliFatty Acid Synthase, Type IITriclosan

Identifiers

PMID18694482
PMCPMC2527308
OpenAlexW2027151731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.