Evidence map›Paper›PMID 18689895›Full record

ArticleGenetics2008

Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae.

Angela Deem, Krista Barker, Kelly Vanhulle, Brandon Downing, Alexandra Vayl, Anna Malkova

Abstract read
In one paragraph

Article in Genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed.

  1. Article
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  7. Mechanisms and genomic implications of break-induced replication.Nature structural & molecular biology · 2025
    Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Break-induced replication: unraveling each step.Trends in genetics : TIG · 2022
    Review
  17. Article
  18. Article
  19. Break-induced replication mechanisms in yeast and mammals.Current opinion in genetics & development · 2021
    Review
  20. Rtt105 promotes high-fidelity DNA replication and repair by regulating the single-stranded DNA-binding factor RPA.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Angela DeemDepartment of Biology, School of Science, Indiana University-Purdue University Indianapolis, Indianapolis, Indiana 46202-5132, USA.
Krista Barker
Kelly Vanhulle
Brandon Downing
Alexandra Vayl
Anna Malkova

Funding

Amplification of risk resulting from mis-routing of double-strand break repairR01GM084242 · NIGMS · UNIVERSITY OF IOWA · PI MALKOVA, ANNA L · 2008 to 2017
$2.7M
Mechanism of break-induced replication in yeastR15GM074657 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI MALKOVA, ANNA L · 2006 to 2006
$261k
NIGMS NIH HHS 1R15GM074657-01A1NIGMS NIH HHS R01 GM084242NIGMS NIH HHS R15 GM074657
6 · The paper itself

Abstract

Break-induced replication (BIR) is an important process of DNA metabolism that has been implicated in the restart of collapsed replication forks, as well as in various chromosomal instabilities, including loss of heterozygosity, translocations, and alternative telomere lengthening. Therefore, knowledge of how BIR is carried out and regulated is important for better understanding the maintenance of genomic stability in eukaryotes. Here we present a new yeast experimental system that enables the genetic control of BIR to be investigated. Analysis of mutations selected on the basis of their sensitivity to various DNA-damaging agents demonstrated that deletion of POL32, which encodes a third, nonessential subunit of polymerase delta, significantly reduced the efficiency of BIR, although some POL32-independent BIR was still observed. Importantly, the BIR defect in pol32Delta cells was associated with the formation of half-crossovers. We propose that these half-crossovers resulted from aberrant processing of BIR intermediates. Furthermore, we suggest that the half-crossovers observed in our system are analogous to nonreciprocal translocations (NRTs) described in mammalian tumor cells and, thus, our system could represent an opportunity to further study the NRT mechanism in yeast.

Indexed as

DNA Breaks, Double-StrandedDNA ReplicationDNA-Directed DNA PolymeraseModels, GeneticMutationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA-Directed DNA PolymerasePol32 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID18689895
PMCPMC2516063

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.