Evidence map›Paper›PMID 18689482›Full record

ArticleJournal of bacteriology2008

The growth-promoting and stress response activities of the Bacillus subtilis GTP binding protein Obg are separable by mutation.

Shrin Kuo, Borries Demeler, W G Haldenwang

Abstract read
In one paragraph

Article in Journal of bacteriology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. RiceG3 (Bethesda, Md.) · 2018
    Article
  5. Article
  6. The bacterial translation stress response.FEMS microbiology reviews · 2014
    Review
  7. Article
  8. Article
  9. The universally conserved prokaryotic GTPases.Microbiology and molecular biology reviews : MMBR · 2011
    Review
  10. Article
  11. STAS domain structure and function.Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology · 2011
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Shrin KuoDepartment of Microbiology and Immunology, The University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229-3900, USA.
Borries Demeler
W G Haldenwang
The University of Texas Health Science Center at San Antonio · US

Funding

UltraScan Software Maintenance and DevelopmentR01RR022200 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DEMELER, BORRIES · 2007 to 2010
$1.7M
CONTROL OF SIGMA BETA ACTIVITY IN B SUBTILISR01GM048220 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI HALDENWANG, WILLIAM GEORGE · 1994 to 2005
$1.7M
CONTROL OF OB ACTIVITY IN B. SUBTILISR55GM048220 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI HALDENWANG, WILLIAM G · 1992 to 1992
–
NCRR NIH HHS R01 RR022200NCRR NIH HHS RR022200NIGMS NIH HHS GM-48220NIGMS NIH HHS R01 GM048220
6 · The paper itself

Abstract

Bacillus subtilis Obg is a ribosome-associating GTP binding protein that is needed for growth, sporulation, and induction of the bacterium's general stress regulon (GSR). It is unclear whether the roles of Obg in sporulation and stress responsiveness are direct or a secondary effect of its growth-promoting functions. The present work addresses this question by an analysis of two obg alleles whose phenotypes argue for direct roles for Obg in each process. The first allele [obg(G92D)] encodes a missense change in the protein's highly conserved "obg fold" region. This mutation impairs cell growth and the ability of Obg to associate with ribosomes but fails to block sporulation or the induction of the GSR. The second obg mutation [obg(Delta22)] replaces the 22-amino-acid carboxy-terminal sequence of Obg with an alternative 26-amino-acid sequence. This Obg variant cofractionates with ribosomes and allows normal growth but blocks sporulation and impairs the induction of the GSR. Additional experiments revealed that the block on sporulation occurs early, preventing the activation of the essential sporulation transcription factor Spo0A, while inhibition of the GSR appears to involve a failure of the protein cascade that normally activates the GSR to effectively catalyze the reactions needed to activate the GSR transcription factor (sigma(B)).

Indexed as

Adaptation, PhysiologicalGene Expression Regulation, BacterialMutation, MissenseSequence DeletionAmino Acid SequenceArtificial Gene FusionBacillus subtilisBacterial Proteinsbeta-GalactosidaseGenes, ReporterGTP-Binding ProteinsModels, BiologicalMolecular Sequence DataProtein BindingRibosomesSignal TransductionBacterial Proteinsbeta-GalactosidaseGTP-Binding ProteinsObg GTP-binding protein, Bacteriaspore-specific proteins, Bacillus

Identifiers

PMID18689482
PMCPMC2566217
OpenAlexW2146472193

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.