Evidence map›Paper›PMID 18689444›Full record

ArticlePlant physiology2008

LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis.

Jinye Mu, Helin Tan, Qi Zheng, Fuyou Fu, Yan Liang, Jian Zhang, Xiaohui Yang, Tai Wang, Kang Chong, Xiu-Jie Wang and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 192 papers.

0numbers the graph read from it
0cells of the map it votes in
192citing papers in PubMed
9.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

192 citing papers in PubMed, 413 citations in OpenAlex.

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  18. Review
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  20. CRISPR-Based Editing of thePlants (Basel, Switzerland) · 2024
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132 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jinye MuState Key Laboratory of Plant Genomics and National Plant Gene Research Center , Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Helin Tan
Qi Zheng
Fuyou Fu
Yan Liang
Jian Zhang
Xiaohui Yang
Tai Wang
Kang Chong
Xiu-Jie Wang
Jianru Zuo
Chinese Academy of Sciences · CNState Key Laboratory of Plant Genomics · CNInstitute of Genetics and Developmental Biology · CNInstitute of Botany · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In plants, fatty acids are de novo synthesized predominantly in plastids from acetyl-coenzyme A. Although fatty acid biosynthesis has been biochemically well studied, little is known about the regulatory mechanisms of the pathway. Here, we show that overexpression of the Arabidopsis (Arabidopsis thaliana) LEAFY COTYLEDON1 (LEC1) gene causes globally increased expression of fatty acid biosynthetic genes, which are involved in key reactions of condensation, chain elongation, and desaturation of fatty acid biosynthesis. In the plastidial fatty acid synthetic pathway, over 58% of known enzyme-coding genes are up-regulated in LEC1-overexpressing transgenic plants, including those encoding three subunits of acetyl-coenzyme A carboxylase, a key enzyme controlling the fatty acid biosynthesis flux. Moreover, genes involved in glycolysis and lipid accumulation are also up-regulated. Consistent with these results, levels of major fatty acid species and lipids were substantially increased in the transgenic plants. Genetic analysis indicates that the LEC1 function is partially dependent on ABSCISIC ACID INSENSITIVE3, FUSCA3, and WRINKLED1 in the regulation of fatty acid biosynthesis. Moreover, a similar phenotype was observed in transgenic Arabidopsis plants overexpressing two LEC1-like genes of Brassica napus. These results suggest that LEC1 and LEC1-like genes act as key regulators to coordinate the expression of fatty acid biosynthetic genes, thereby representing promising targets for genetic improvement of oil production plants.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsCCAAT-Enhancer-Binding ProteinsFatty AcidsGene Expression ProfilingGenes, PlantGlycolysisLipidsMolecular Sequence DataOligonucleotide Array Sequence AnalysisPhenotypePlants, Genetically ModifiedPlasmidsReverse Transcriptase Polymerase Chain ReactionRNA, PlantArabidopsis ProteinsCCAAT-Enhancer-Binding ProteinsFatty AcidsLEC1 protein, ArabidopsisLipidsRNA, Plant

Identifiers

PMID18689444
PMCPMC2556827
OpenAlexW2001781083

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.