Evidence map›Paper›PMID 18687895›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

A link between SIN1 (MAPKAP1) and poly(rC) binding protein 2 (PCBP2) in counteracting environmental stress.

Debjani Ghosh, Gyan P Srivastava, Dong Xu, Laura C Schulz, R Michael Roberts

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

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  18. Deconvoluting mTOR biology.Cell cycle (Georgetown, Tex.) · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Debjani GhoshDepartment of Animal Sciences, University of Missouri, Columbia, MO 65211, USA.
Gyan P Srivastava
Dong Xu
Laura C Schulz
R Michael Roberts
University of Missouri · US

Funding

The Role of Leptin in Placental DevelopmentR00HD055231 · NICHD · UNIVERSITY OF MISSOURI-COLUMBIA · PI SCHULZ, LAURA CLAMON · 2010 to 2011
$743k
6 · The paper itself

Abstract

When SIN1 (MAPKAP1) was used as the bait in a two-hybrid screen of a human bone marrow cDNA library, its most frequent partner was poly(rC) binding protein 2 (PCBP2/hnRNP-E2), which associates with the N-terminal domain of SIN1 and can be coimmunoprecipitated with SIN1 and the cytoplasmic domain of the IFN receptor IFNAR2 from HeLa cells. SIN1, but not PCBP2, also associates with the receptors that bind TNFalpha. PCBP2 is known to bind pyrimidine-rich repeats within the 3' UTR of mRNAs and has been implicated in control of RNA stability and translation and selective cap-independent transcription. RNAi silencing of either SIN1 or PCBP2 renders cells sensitive to basal and stress-induced apoptosis. Stress in the form of TNFalpha and H(2)O(2) treatments rapidly raises the cell content of SIN1 and PCBP2, an effect reversible by inhibiting MAPK14. A meta analysis of human microarray information with an algorithm that discerns similarities in gene-regulatory profiles shows that SIN1 and PCBP2 are generally coregulated with large numbers of genes implicated in both cell survival and death and in cellular stress responses, including RNA translation and processing. We predict that SIN1 is a scaffold protein that organizes antiapoptotic responses in stressed cells, whereas PCBP2, its binding partner, provides for the selective expression of cell survival factors through posttranslational events.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsCell LineComputational BiologyHumansMAP Kinase Signaling SystemMiceMitogen-Activated Protein Kinase 14Protein BindingRNA-Binding ProteinsRNA, Small InterferingSubstrate SpecificityTumor Necrosis Factor-alphaUp-RegulationAdaptor Proteins, Signal TransducingMAPKAP1 protein, humanMitogen-Activated Protein Kinase 14PCBP2 protein, humanRNA-Binding ProteinsRNA, Small InterferingTumor Necrosis Factor-alpha

Identifiers

PMID18687895
PMCPMC2503925
OpenAlexW2049236749

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.