Evidence map›Paper›PMID 18684714›Full record

ArticleThe Journal of biological chemistry2008

Role of Jade-1 in the histone acetyltransferase (HAT) HBO1 complex.

Rebecca L Foy, Ihn Young Song, Vipul C Chitalia, Herbert T Cohen, Nehme Saksouk, Christelle Cayrou, Cyrus Vaziri, Jacques Côté, Maria V Panchenko

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 74 citations in OpenAlex.

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  16. ExcessiveFrontiers in cell and developmental biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Rebecca L FoyDepartment of Medicine, Section of Nephrology, Boston University School of Medicine and Medical Center, Evans Biomedical Research Center, Boston, Massachusetts 02118, USA.
Ihn Young Song
Vipul C Chitalia
Herbert T Cohen
Nehme Saksouk
Christelle Cayrou
Cyrus Vaziri
Jacques Côté
Maria V Panchenko
Boston University · USUniversité Laval · CABoston Medical Center · USHôtel-Dieu de Québec · CA

Funding

VHL, Jade-1 and protein stability in renal cancerR01CA079830 · NCI · BOSTON MEDICAL CENTER · PI COHEN, HERBERT TOD · 1999 to 2014
$4.0M
Jade-1 in cystic renal diseaseR01DK067569 · NIDDK · BOSTON MEDICAL CENTER · PI COHEN, HERBERT TOD · 2004 to 2008
$1.5M
A Novel DNA Re-replication CheckpointR01ES012917 · NIEHS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI VAZIRI, CYRUS · 2004 to 2008
$1.5M
Histone Acetyl Transferase HBO1 in kidney epithelial cell cycleR01DK087910 · NIDDK · BOSTON UNIVERSITY MEDICAL CAMPUS · PI PANCHENKO, MARIA V · 2011 to 2015
$1.4M
Role of Wnt signaling in uremia-induced entothelial dysfunctionK08DK080946 · NIDDK · BOSTON MEDICAL CENTER · PI CHITALIA, VIPUL C · 2009 to 2013
$746k
CIHR 64289-2CIHR 87253-1NCI NIH HHS R01 CA079830NCI NIH HHS R01 CA79830NIDDK NIH HHS K08 DK080946NIDDK NIH HHS R01 DK067569NIDDK NIH HHS R01 DK087910NIDDK NIH HHS R01 DK67569NIEHS NIH HHS R01 ES12917
6 · The paper itself

Abstract

Regulation of global chromatin acetylation is important for chromatin remodeling. A small family of Jade proteins includes Jade-1L, Jade-2, and Jade-3, each bearing two mid-molecule tandem plant homology domain (PHD) zinc fingers. We previously demonstrated that the short isoform of Jade-1L protein, Jade-1, is associated with endogenous histone acetyltransferase (HAT) activity. It has been found that Jade-1L/2/3 proteins co-purify with a novel HAT complex, consisting of HBO1, ING4/5, and Eaf6. We investigated a role for Jade-1/1L in the HBO1 complex. When overexpressed individually, neither Jade-1/1L nor HBO1 affected histone acetylation. However, co-expression of Jade-1/1L and HBO1 increased acetylation of the bulk of endogenous histone H4 in epithelial cells in a synergistic manner, suggesting that Jade1/1L positively regulates HBO1 HAT activity. Conversely, small interfering RNA-mediated depletion of endogenous Jade resulted in reduced levels of H4 acetylation. Moreover, HBO1-mediated H4 acetylation activity was enhanced severalfold by the presence of Jade-1/1L in vitro. The removal of PHD fingers affected neither binding nor mutual Jade-1-HBO1 stabilization but completely abrogated the synergistic Jade-1/1L- and HBO1-mediated histone H4 acetylation in live cells and in vitro with reconstituted oligonucleosome substrates. Therefore, PHDs are necessary for Jade-1/1L-induced acetylation of nucleosomal histones by HBO1. In contrast to Jade-1/1L, the PHD zinc finger protein ING4/5 failed to synergize with HBO1 to promote histone acetylation. The physical interaction of ING4/5 with HBO1 occurred in the presence of Jade-1L or Jade-3 but not with the Jade-1 short isoform. In summary, this study demonstrates that Jade-1/1L are crucial co-factors for HBO1-mediated histone H4 acetylation.

Indexed as

Cell LineCell NucleusChromatinGene Expression RegulationGene Expression Regulation, EnzymologicGenes, ReporterHistone AcetyltransferasesHistonesHomeodomain ProteinsHumansModels, BiologicalProtein IsoformsRNA, Small InterferingTransfectionTumor Suppressor ProteinsChromatinHistone AcetyltransferasesHistonesHomeodomain ProteinsJADE1 protein, humanKAT7 protein, humanProtein IsoformsRNA, Small InterferingTumor Suppressor Proteins

Identifiers

PMID18684714
PMCPMC2570895
OpenAlexW1997038243

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.