Evidence map›Paper›PMID 18683964›Full record

ArticleJournal of proteome research2008

Proteome response to the panneural expression of human wild-type alpha-synuclein: a Drosophila model of Parkinson's disease.

Zhiyin Xun, Thomas C Kaufman, David E Clemmer

Abstract read
In one paragraph

Article in Journal of proteome research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. TheFrontiers in neuroscience · 2021
    Article
  3. Impact of Autophagy and Aging on Iron Load and Ferritin inFrontiers in cell and developmental biology · 2019
    Article
  4. Glia in Drosophila behavior.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2015
    Review
  5. Article
  6. Article
  7. Article
  8. Chemical measurements in Drosophila.Trends in analytical chemistry : TRAC · 2009
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhiyin XunDepartment of Chemistry, Indiana University, Bloomington, Indiana 47405, USA.
Thomas C Kaufman
David E Clemmer
Indiana University Bloomington · US

Funding

New proteome technologies: mapping adult D. melanogasterR01AG024547 · NIA · TRUSTEES OF INDIANA UNIVERSITY · PI CLEMMER, DAVID E. · 2005 to 2008
$955k
NIA NIH HHS R01 AG024547NIA NIH HHS R01-AG-024547-3
6 · The paper itself

Abstract

The alpha-synuclein protein is associated with several neurodegenarative diseases, including Parkinson's disease (PD). In humans, only mutated forms of alpha-synuclein are linked to PD; however, panneural expression of human wild-type (WT) alpha-synuclein induces Parkinson's like-symptoms in Drosophila. Here, we report a quantitative proteomic analysis of WT alpha-synuclein transgenic flies with age-matched controls at the presymptomatic stage utilizing a global isotopic labeling strategy combined with multidimensional liquid chromatographies and tandem mass spectrometry. The analysis includes two biological replicates, in which samples are isotopically labeled in forward and reverse directions. In total, 229 proteins were quantified from assignments of at least two peptide sequences. Of these, 188 (82%) proteins were detected in both forward and reverse labeling measurements. Twelve proteins were found to be differentially expressed in response to the expression of human WT alpha-synuclein; down-regulations of larval serum protein 2 and fat body protein 1 levels were confirmed by Western blot analysis. Gene Ontology analysis indicates that the dysregulated proteins are primarily associated with cellular metabolism and signaling, suggesting potential contributions of perturbed metabolic and signaling pathways to PD. An increased level of the iron (III)-binding protein, ferritin, typically found in the brains of PD patients, is also observed in presymptomatic WT alpha-synuclein expressing animals. The observed alterations in both pathology-associated and novel proteins may shed light on the pathological roles of alpha-synuclein that may lead to the development of diagnostic strategies at the presymptomatic stage.

Indexed as

Disease Models, AnimalProteomealpha-SynucleinAmino Acid SequenceAnimalsAnimals, Genetically ModifiedBlotting, WesternChromatography, LiquidDrosophilaHumansMolecular Sequence DataParkinson DiseaseReference StandardsTandem Mass Spectrometryalpha-SynucleinProteome

Identifiers

PMID18683964
PMCPMC3780383
OpenAlexW2102295976

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.