Evidence map›Paper›PMID 18683220›Full record

ArticleThe Journal of comparative neurology2008

Syntaxin 3b is a t-SNARE specific for ribbon synapses of the retina.

Leigh B Curtis, Blair Doneske, Xiaoqin Liu, Christina Thaller, James A McNew, Roger Janz

Open access · greenAbstract read
In one paragraph

Article in The Journal of comparative neurology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  6. Syntaxin 3B: A SNARE Protein Required for Vision.International journal of molecular sciences · 2024
    Review
  7. Review
  8. Review
  9. The role of syntaxins in retinal function and health.Frontiers in cellular neuroscience · 2024
    Review
  10. Article
  11. Article
  12. T-Type CaThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Leigh B CurtisDepartment of Neurobiology and Anatomy, The University of Texas Medical School, Houston, Texas 77030, USA.
Blair Doneske
Xiaoqin Liu
Christina Thaller
James A McNew
Roger Janz
The University of Texas at Austin · USRice University · USBaylor College of Medicine · US

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI TOLIAS, KIMBERLY R · 1988 to 2013
$29.4M
Functional Reconstitution of Yeast ExocytosisR01GM071832 · NIGMS · RICE UNIVERSITY · PI MCNEW, JAMES A · 2006 to 2010
$1.4M
Role of SV2B in Ribbon Synapses of the RetinaR01EY016452 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI JANZ, ROGER · 2005 to 2008
$1.4M
TRAINING IN NEUROSCIENCET32NS007467 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI WAXHAM, M. NEAL · 1999 to 2008
$990k
NEI NIH HHS EY016452NEI NIH HHS R01 EY016452NICHD NIH HHS HD024064 C3NICHD NIH HHS P30 HD024064NIGMS NIH HHS GM071832NIGMS NIH HHS R01 GM071832NINDS NIH HHS T32 NS007467
6 · The paper itself

Abstract

Previous studies have demonstrated that ribbon synapses in the retina do not contain the t-SNARE (target-soluble N-ethylmaleimide-sensitive factor attachment protein receptor) syntaxin 1A that is found in conventional synapses of the nervous system. In contrast, ribbon synapses of the retina contain the related isoform syntaxin 3. In addition to its localization in ribbon synapses, syntaxin 3 is also found in nonneuronal cells, where it has been implicated in the trafficking of transport vesicles to the apical plasma membrane of polarized cells. The syntaxin 3 gene codes for four different splice forms, syntaxins 3A, 3B, 3C, and 3D. We demonstrate here by using analysis of EST databases, RT-PCR, in situ hybridization, and Northern blot analysis that cells in the mouse retina express only syntaxin 3B. In contrast, nonneuronal tissues, such as kidney, express only syntaxin 3A. The two major syntaxin isoforms (3A and 3B) have an identical N-terminal domain but differ in the C-terminal half of the SNARE domain and the C-terminal transmembrane domain. These two domains are thought to be directly involved in synaptic vesicle fusion. The interaction of syntaxin 1A and syntaxin 3B with other synaptic proteins was examined. We found that both proteins bind Munc18/N-sec1 with similar affinity. In contrast, syntaxin 3B had a much lower binding affinity for the t-SNARE SNAP25 compared with syntaxin 1A. By using an in vitro fusion assay, we could demonstrate that vesicles containing syntaxin 3B and SNAP25 could fuse with vesicles containing synaptobrevin2/VAMP2, demonstrating that syntaxin 3B can function as a t-SNARE.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsLiposomesMembrane FusionMiceMice, Inbred C57BLMolecular Sequence DataProtein IsoformsQa-SNARE ProteinsRetinaSequence AlignmentSequence Homology, Amino AcidSNARE ProteinsSynapsesSynaptosomal-Associated Protein 25LiposomesProtein IsoformsQa-SNARE ProteinsSnap25 protein, mouseSNARE ProteinsSynaptosomal-Associated Protein 25

Identifiers

PMID18683220
PMCPMC2893228
OpenAlexW2088281414

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.