Evidence map›Paper›PMID 18683033›Full record

ArticleJournal of clinical immunology2009

Engineered Alt a 13 fragment of Alternaria alternata abrogated IgE binding without affecting T-cell stimulation.

Jay Shankar, Bhanu P Singh, Shailendra N Gaur, Naveen Arora

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of clinical immunology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Changes in the Sensitization Pattern toJournal of fungi (Basel, Switzerland) · 2021
    Article
  2. Article
  3. Mold allergens in respiratory allergy: from structure to therapy.Allergy, asthma & immunology research · 2015
    Review
  4. Alternaria alternata and its allergens: a comprehensive review.Clinical reviews in allergy & immunology · 2014
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jay ShankarInstitute of Genomics and Integrative Biology, Mall Road, Delhi, 110007, India.
Bhanu P Singh
Shailendra N Gaur
Naveen Arora
Institute of Genomics and Integrative Biology · INUniversity of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

rationaleEpitopes were delineated for allergenic proteins, but studies are required to identify residues mediating IgE binding. In the present study, the in silico approach was used to identify IgE-binding residues of Alt a 13(1-50) fragment and confirmed by experimental approach. METHOD AND

resultsIgE-binding epitopes of Alt a 13 mapped computationally were cloned, expressed, purified, and characterized using various immunochemical and biophysical methods. Among four fragments of Alt a 13, Alt a 13(1-50) demonstrated maximum IgE binding with two immunodominant regions and was mutated at these regions. The mutation in first region, Alt a 13(1-50)-K4A_S6F, did not show any change in immunological and biophysical properties of protein. However, mutations in the second region, Alt a 13(1-50)-T21F_N27I, caused reduced IgE binding, histamine release, and low IL-4 release on stimulation of Alternaria alternata positive patients peripheral blood mononuclear cells in vitro.

conclusionThis suggests that residues T21 and N27 are important for the secondary structure. In conclusion, Alt a 13(1-50)-T21F_N27I with reduced Th 2 response and intact T-cell proliferation capacity has potential for clinical use.

Indexed as

AdolescentAdultAlternariaAntibodies, FungalAntigens, FungalComputational BiologyEpitope MappingEpitopesFemaleHistamine ReleaseHumansHypersensitivityImmunoglobulin ELeukocytes, MononuclearMaleMiddle AgedAntibodies, FungalAntigens, FungalEpitopesImmunoglobulin EMutant ProteinsPeptide Fragments

Identifiers

PMID18683033
OpenAlexW2064591902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.