Evidence map›Paper›PMID 18682896›Full record

ArticleMolecular and cellular biochemistry2008

Genomic and proteomic characterization of YDOV-157, a newly established human epithelial ovarian cancer cell line.

HanByoul Cho, Eun Suk Kang, Soon Won Hong, Youn Jin Oh, Sun Mi Choi, Sang Wun Kim, Sung Hoon Kim, Young Tae Kim, Kyoung Sun Lee, Yang Kyu Choi and 1 more

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In one paragraph

Article in Molecular and cellular biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  6. Lipocalin2 expressions correlate significantly with tumor differentiation in epithelial ovarian cancer.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

HanByoul ChoDepartment of Obstetrics and Gynecology, Yonsei University College of Medicine, Seoul, Korea.
Eun Suk Kang
Soon Won Hong
Youn Jin Oh
Sun Mi Choi
Sang Wun Kim
Sung Hoon Kim
Young Tae Kim
Kyoung Sun Lee
Yang Kyu Choi
Jae-Hoon Kim
Yonsei University · KRKonkuk University · KRKonkuk University Medical Center · KRSeverance Hospital · KRSungkyunkwan University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The existence of several model systems with which to investigate a particular disease is advantageous for researchers. This is especially true for ovarian cancer, which, due to its complex and heterogeneous nature, inherently requires a large number of model systems. Here, we report a new ovarian serous adenocarcinoma cell line, designated YDOV-157, and characterized via post genomics and post proteomics. In this study, primary culture of tumor cells from ascites was performed and the cells were immortalized up to at least 60 passages in vitro. We studied the morphologies, cell proliferation, BRCA1/2 mutations, tumorigenesis capacity, and chemosensitivity of YDOV-157. Using a cDNA microarray, differentially expressed genes were identified and some of them were validated. Using proteomic analysis, we identified proteins that were differentially expressed in YDOV-157. The newly derived cell line, designated YDOV-157, grew as a monolayer and the doubling time was 102 h. When transplanted into nude mice, it initiated the formation of tumor masses with microscopic findings identical to those of the primary tumor. Chemosensitivity test showed that paclitaxel induced the highest chemosensitivity index. In microarray analysis, 2,520 probes were differently expressed, compared to human ovarian surface epithelial cells (HOSEs). In SYBR Green real-time PCR, the expression of E2F2 (P = 0.040) and CRABP2 genes (P = 0.030) was significantly higher in the ovarian cancer cell lines than in HOSEs. Furthermore, proteomic analysis showed that expression of 28 spots was significantly altered between YDOV-157 and HOSE. In conclusion, the newly derived YDOV-157 cell line may be an important research resource for studying cancer cell biology and should also be very useful for developing new strategies that inhibit cancer cell growth and progression.

Indexed as

Gene Expression Regulation, NeoplasticModels, BiologicalAdenocarcinomaCell Line, TumorFemaleGene Expression ProfilingHumansNeoplasm ProteinsOligonucleotide Array Sequence AnalysisOvarian NeoplasmsProteomicsNeoplasm Proteins

Identifiers

PMID18682896
OpenAlexW2088182546

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.