Evidence map›Paper›PMID 18681980›Full record

ArticleBMC infectious diseases2008

The recent-transmission of Mycobacterium tuberculosis strains among Iranian and Afghan relapse cases: a DNA-fingerprinting using RFLP and spoligotyping.

Parissa Farnia, Mohammad Reza Masjedi, Mohammad Varahram, Mehdi Mirsaeidi, Mojtaba Ahmadi, Mehdi Khazampour, Payam Tabarsi, Parvaneh Baghei, Mojtaba Marjane, Muslam Bahadori and 2 more

Abstract read
In one paragraph

Article in BMC infectious diseases, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Role of Immigration in Tuberculosis Transmission to Iran: A Systematic Review.International journal of preventive medicine · 2020
    Review
  7. Article
  8. Article
  9. Article
  10. Molecular typing methods used in studies ofIranian journal of microbiology · 2016
    Review
  11. Review
  12. Prevalence and occurrence rate of Mycobacterium tuberculosis Haarlem family multi-drug resistant in the worldwide population: A systematic review and meta-analysis.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2015
    Review
  13. Review
  14. Lessons from the profile of kidney diseases among Afghan refugees.Medical science monitor : international medical journal of experimental and clinical research · 2014
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Parissa FarniaMycobacteriology Research Centre, Iranian National Reference TB Laboratory, National Research Institute Of Tuberculosis and Lung Disease, Shaheed Bahesti University of Medical Sciences (Medical Campus), Darabad, Tehran, Iran. pfarnia@yahoo.com
Mohammad Reza Masjedi
Mohammad Varahram
Mehdi Mirsaeidi
Mojtaba Ahmadi
Mehdi Khazampour
Payam Tabarsi
Parvaneh Baghei
Mojtaba Marjane
Muslam Bahadori
Abolhasan Zia Zarifi
Ali Akbar Velayati

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRelapse of tuberculosis (TB) may develop as the result of reactivation of the endogenous primary infection, or as a result of a exogenous reinfection. This survey evaluated the rate of reactivation versus recent transmission among Iranian and Afghan relapse cases.

methodsThe sputum specimens were digested, examined microscopically for acid-fast bacilli, and inoculated into Löwenstein-Jensen slants by standard procedures. Thereafter, the susceptibility and identification tests were performed on culture positive specimens. Subsequently, the strains that were identified as Mycobacterium tuberculosis (258 isolates) were subjected to IS6110 restriction fragment length polymorphism (RFLP) and spoligotyping. Additional patient's information was collected for further epidemiological analysis. Patients whose isolates had identical genotyping patterns were considered a cluster with recent transmission episode.

resultsOut of 258 available isolates, 72(28%) had multi-drug resistant (MDR-TB) in ratio and 42 (16.2%) had other resistant. Notably, 38 of MDR-TB cases (52%) were isolated from Afghan patients. By IS6110-RFLP typing method, 65 patients (25%) were clustered in 29 clusters. In cluster cases, the intra-community transmissions between Iranian and Afghan patients were 41%. All MDR-TB patients in clusters had either Haarlem I or Beijing characteristic. The risk factors like sex, family history, close contact, living condition, PPD test result and site of TB infection were not associated with clustering. Although, the MDR-TB strains were more frequent in non-cluster cases (31%) than cluster one(18%) (P < 0.05). Majority of M. tuberculosis strains isolated from non-cluster cases were belong to EAI3 (51; 30%) and CASI(32;18.6%) superfamilies.

conclusionDuring the studied period, reactivation of a previous infection remain the more probable cause of recurrence. Although, the evidence of intra- community transmission between Iranian and Afghan TB cases, highlighted the impact of afghan immigrants in national tuberculosis control program (NTP) of Iran.

Indexed as

Polymorphism, Restriction Fragment LengthAdultAfghanistanAgedBacterial Typing TechniquesDNA FingerprintingDrug Resistance, Multiple, BacterialFemaleHumansIranMaleMicrobial Sensitivity TestsMiddle AgedMycobacterium tuberculosisRecurrenceSputum

Identifiers

PMID18681980
PMCPMC2518555

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.