Evidence map›Paper›PMID 18678493›Full record

ArticleBioorganic & medicinal chemistry2008

Allele-specific inhibition of divergent protein tyrosine phosphatases with a single small molecule.

Xin-Yu Zhang, Vincent L Chen, Mari S Rosen, Elizabeth R Blair, Anna Mari Lone, Anthony C Bishop

Open access · bronzeAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

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  11. Chemical rescue of protein tyrosine phosphatase activity.Chemical communications (Cambridge, England) · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xin-Yu ZhangAmherst College, Department of Chemistry, Amherst, MA 01002, USA.
Vincent L Chen
Mari S Rosen
Elizabeth R Blair
Anna Mari Lone
Anthony C Bishop
Amherst College · US

Funding

Target-specific inhibition and activation of protein tyrosine phosphatasesR15GM071388 · NIGMS · AMHERST COLLEGE · PI BISHOP, ANTHONY C · 2005 to 2021
$1.6M
NIGMS NIH HHS 1 R15 GM017388-01A1NIGMS NIH HHS R15 GM071388
6 · The paper itself

Abstract

A central challenge of chemical biology is the development of small-molecule tools for controlling protein activity in a target-specific manner. Such tools are particularly useful if they can be systematically applied to the members of large protein families. Here we report that protein tyrosine phosphatases can be systematically 'sensitized' to target-specific inhibition by a cell-permeable small molecule, Fluorescein Arsenical Hairpin Binder (FlAsH), which does not inhibit any wild-type PTP investigated to date. We show that insertion of a FlAsH-binding peptide at a conserved position in the PTP catalytic-domain's WPD loop confers novel FlAsH sensitivity upon divergent PTPs. The position of the sensitizing insertion is readily identifiable from primary-sequence alignments, and we have generated FlAsH-sensitive mutants for seven different classical PTPs from six distinct subfamilies of receptor and non-receptor PTPs, including one phosphatase (PTP-PEST) whose three-dimensional catalytic-domain structure is not known. In all cases, FlAsH-mediated PTP inhibition was target specific and potent, with inhibition constants for the seven sensitized PTPs ranging from 17 to 370 nM. Our results suggest that a substantial fraction of the PTP superfamily will be likewise sensitizable to allele-specific inhibition; FlAsH-based PTP targeting thus potentially provides a rapid, general means for selectively targeting PTP activity in cell-culture- or model-organism-based signaling studies.

Indexed as

AllelesAmino Acid SequenceDose-Response Relationship, DrugDrug DesignDrug Evaluation, PreclinicalEnzyme InhibitorsModels, MolecularMolecular StructureMolecular WeightMutagenesis, InsertionalOligopeptidesProtein Tyrosine PhosphatasesSequence AlignmentStructure-Activity RelationshipSubstrate SpecificityTime FactorsEnzyme InhibitorsOligopeptidesProtein Tyrosine Phosphatases

Identifiers

PMID18678493
PMCPMC2561268
OpenAlexW2051165808

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.