Evidence map›Paper›PMID 18677484›Full record

ArticleCancer chemotherapy and pharmacology2009

The Werner's syndrome 4330T>C (Cys1367Arg) gene variant does not affect the in vitro cytotoxicity of topoisomerase inhibitors and platinum compounds.

Federico Innocenti, Snezana Mirkov, Ramamoorthy Nagasubramanian, Jacqueline Ramírez, Wanqing Liu, Wasim K Bleibel, Sunita J Shukla, Kathleen Hennessy, Gary L Rosner, Edwin Cook and 2 more

Open access · greenAbstract read
In one paragraph

Article in Cancer chemotherapy and pharmacology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Predictive impact of genetic polymorphisms in DNA repair genes on susceptibility and therapeutic outcomes to colorectal cancer patients.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Federico InnocentiDepartment of Medicine, The University of Chicago, 5841 South Maryland Avenue, MC 2115, Chicago, IL 60637, USA. finnocen@medicine.bsd.uchicago.edu
Snezana Mirkov
Ramamoorthy Nagasubramanian
Jacqueline Ramírez
Wanqing Liu
Wasim K Bleibel
Sunita J Shukla
Kathleen Hennessy
Gary L Rosner
Edwin Cook
M Eileen Dolan
Mark J Ratain
University of Chicago · USCancer Research Center · USUniversity of Illinois Chicago · USThe University of Texas MD Anderson Cancer Center · US

Funding

Whole GenomeU01GM061393 · NIGMS · UNIVERSITY OF CHICAGO · PI RATAIN, MARK J · 2000 to 2014
$39.0M
THE STANFORD PHARMACOGENETICS KNOWLEDGE BASEU01GM061374 · NIGMS · STANFORD UNIVERSITY · PI ALTMAN, RUSS BIAGIO · 2000 to 2009
$24.0M
NIGMS NIH HHS U01 GM061374NIGMS NIH HHS U01 GM061393NIGMS NIH HHS U01GM61374NIGMS NIH HHS U01GM61393
6 · The paper itself

Abstract

purposeWerner's syndrome (WS) is a recessive disorder of premature onset of processes associated with aging. Defective DNA repair has been reported after exposure of cells isolated from WS patients to DNA-damaging agents. The germline 4330T>C (Cys1367Arg) variant in the WS gene (WRN) has been associated with protection from age-related diseases, suggesting it has a functional role. We studied whether the 4330T>C variant confers altered drug sensitivity in vitro.

methods4330T>C was genotyped in 372 human lymphoblastoid cell lines (LCLs) from unrelated healthy Caucasian individuals using a TaqMan-based method. The study was powered to detect the effect of the 4330T>C genotypes after exposure to camptothecin (based upon preliminary data). The effect of the 4330T>C variant on the cytotoxicity of etoposide, carboplatin, cisplatin and daunorubicin was also tested. WRN expression in 57 LCLs was measured by microarray.

resultsNo significant difference between the IC50 of the cells was observed among genotypes (P = 0.46) after exposure to camptothecin. No association was also observed for etoposide, carboplatin, cisplatin, and daunorubicin (ANOVA, P > 0.05). WRN expression also did not vary across genotypes (ANOVA, P = 0.37).

conclusionThese results suggest that this nonsynonymous variant has relatively normal function at the cellular level.

Indexed as

Topoisomerase InhibitorsAntibiotics, AntineoplasticAntineoplastic AgentsAntineoplastic Agents, PhytogenicB-LymphocytesCamptothecinCarboplatinCell ProliferationCells, CulturedCell SurvivalCisplatinDaunorubicinEnzyme InhibitorsEtoposideExodeoxyribonucleasesGenotypeAntibiotics, AntineoplasticAntineoplastic AgentsAntineoplastic Agents, PhytogenicCamptothecinCarboplatinCisplatinDaunorubicinEnzyme InhibitorsEtoposideExodeoxyribonucleasesPlatinum CompoundsRecQ HelicasesRNA, MessengerTopoisomerase InhibitorsWerner Syndrome HelicaseWRN protein, human

Identifiers

PMID18677484
PMCPMC2731557
OpenAlexW2027029833

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.