Evidence map›Paper›PMID 18676813›Full record

ArticleGenes & development2008

PU.1 expression is modulated by the balance of functional sense and antisense RNAs regulated by a shared cis-regulatory element.

Alexander K Ebralidze, Florence C Guibal, Ulrich Steidl, Pu Zhang, Sanghoon Lee, Boris Bartholdy, Meritxell Alberich Jorda, Victoria Petkova, Frank Rosenbauer, Gang Huang and 8 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 172 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. iScience · 2023
    Article
  8. The Functional Meaning of 5'UTR in Protein-Coding Genes.International journal of molecular sciences · 2023
    Review
  9. Review
  10. Article
  11. Article
  12. Long Non-coding RNAs, LncSub-cellular biochemistry · 2022
    Article
  13. Review
  14. LncRNA-DUXAP8 Regulation of the Wnt/β-Catenin Signaling Pathway to Inhibit Glycolysis and Induced Apoptosis in Acute Myeloid LeukemiaTurkish journal of haematology : official journal of Turkish Society of Haematology · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 4 countries.

Alexander K EbralidzeHarvard Institutes of Medicine, Harvard Stem Cell Institute, Harvard Medical School, Beth Israel Deaconess Medical Center, Boston, Massachusetts 02115, USA.
Florence C Guibal
Ulrich Steidl
Pu Zhang
Sanghoon Lee
Boris Bartholdy
Meritxell Alberich Jorda
Victoria Petkova
Frank Rosenbauer
Gang Huang
Tajhal Dayaram
Johanna Klupp
Karen B O'Brien
Britta Will
Maarten Hoogenkamp
Katherine L B Borden
Constanze Bonifer
Daniel G Tenen
Beth Israel Deaconess Medical Center · USUniversity of Leeds · GBAlbert Einstein College of Medicine · USInstitute for Research in Immunology and Cancer · CAMax Delbrück Center · DE

Funding

MOLECULAR BIOLOGY OF MYELOID DIFFERENTIATIONR01CA041456 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI TENEN, DANIEL G · 1986 to 2010
$4.6M
NCI NIH HHS CA41456NCI NIH HHS R01 CA041456
6 · The paper itself

Abstract

The transcription factor PU.1 is an important regulator of hematopoiesis; precise expression levels are critical for normal hematopoietic development and suppression of leukemia. We show here that noncoding antisense RNAs are important modulators of proper dosages of PU.1. Antisense and sense RNAs are regulated by shared evolutionarily conserved cis-regulatory elements, and we can show that antisense RNAs inhibit PU.1 expression by modulating mRNA translation. We propose that such antisense RNAs will likely be important in the regulation of many genes and may be the reason for the large number of overlapping complementary transcripts with so far unknown function.

Indexed as

Gene ExpressionAnimalsCell LineElectroporationGranulocytesHL-60 CellsHumansImmunomagnetic SeparationJurkat CellsMacrophagesMiceModels, GeneticProtein BiosynthesisProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Regulatory Sequences, Nucleic AcidProto-Oncogene ProteinsProto-Oncogene Protein Spi-1RNA, AntisenseRNA, MessengerRNA, Small InterferingTrans-Activators

Identifiers

PMID18676813
PMCPMC2492744
OpenAlexW2163474660

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.