Evidence map›Paper›PMID 18675277›Full record

ArticleJournal of molecular biology2008

Transposition of Mboumar-9: identification of a new naturally active mariner-family transposon.

Martín Muñoz-López, Azeem Siddique, Julien Bischerour, Pedro Lorite, Ronald Chalmers, Teresa Palomeque

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Martín Muñoz-LópezDepartamento de Biología Experimental, Area de Genética, Universidad de Jaén, 23071 Jaén, Spain.
Azeem Siddique
Julien Bischerour
Pedro Lorite
Ronald Chalmers
Teresa Palomeque
University of Oxford · GBUniversidad de Jaén · ESUniversity of Nottingham · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Although mariner transposons are widespread in animal genomes, the vast majority harbor multiple inactivating mutations and only two naturally occurring elements are known to be active. Previously, we discovered a mariner-family transposon, Mboumar, in the satellite DNA of the ant Messor bouvieri. Several copies of the transposon contain a full-length open reading frame, including Mboumar-9, which has 64% nucleotide identity to Mos1 of Drosophila mauritiana. To determine whether Mboumar is currently active, we expressed and purified the Mboumar-9 transposase and demonstrate that it is able to catalyze the movement of a transposon from one plasmid to another in a genetic in vitro hop assay. The efficiency is comparable to that of the well-characterized mariner transposon Mos1. Transposon insertions were precise and were flanked by TA duplications, a hallmark of mariner transposition. Mboumar has been proposed to have a role in the evolution and maintenance of satellite DNA in M. bouvieri and its activity provides a means to examine the involvement of the transposon in the genome dynamics of this organism.

Indexed as

AntsGenes, InsectAnimalsBase SequenceDNA-Binding ProteinsDNA, SatelliteDNA Transposable ElementsEvolution, MolecularInsect ProteinsMolecular Sequence DataPlasmidsSequence AlignmentTransposasesDNA-Binding ProteinsDNA, SatelliteDNA Transposable ElementsInsect Proteinsmariner transposasesTransposases

Identifiers

PMID18675277
PMCPMC2581405
OpenAlexW2129464216

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.