Evidence map›Paper›PMID 18674750›Full record

ArticleAmerican journal of human genetics2008

WW-domain-containing oxidoreductase is associated with low plasma HDL-C levels.

Jenny C Lee, Daphna Weissglas-Volkov, Mira Kyttälä, Zari Dastani, Rita M Cantor, Eric M Sobel, Christopher L Plaisier, James C Engert, Marleen M J van Greevenbroek, John P Kane and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 2 pooled it
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 2 syntheses or guidelines pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. WWOX and metabolic regulation in normal and pathological conditions.Journal of molecular medicine (Berlin, Germany) · 2022
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. WWOX Loss of Function in Neurodevelopmental and Neurodegenerative Disorders.International journal of molecular sciences · 2020
    Review
  14. TheExperimental biology and medicine (Maywood, N.J.) · 2020
    Review
  15. Article
  16. Article
  17. Review
  18. Frontiers in oncology · 2018
    Review
  19. Modeling WWOX Loss of FunctionFrontiers in oncology · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 12 institutions in 5 countries.

Jenny C LeeDepartment of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA.
Daphna Weissglas-Volkov
Mira Kyttälä
Zari Dastani
Rita M Cantor
Eric M Sobel
Christopher L Plaisier
James C Engert
Marleen M J van Greevenbroek
John P Kane
Mary J Malloy
Clive R Pullinger
Adriana Huertas-Vazquez
Carlos A Aguilar-Salinas
Teresa Tusie-Luna
Tjerk W A de Bruin
Bradley E Aouizerat
Carla C J van der Kallen
Carlo M Croce
Rami I Aqeilan
Michel Marcil
Jorma S A Viikari
Terho Lehtimäki
Olli T Raitakari
Johanna Kuusisto
Markku Laakso
Marja-Riitta Taskinen
Jacques Genest
Päivi Pajukanta
University of California, Los Angeles · USUniversity of California, San Francisco · USMaastricht University · NLInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXKuopio University Hospital · FIRoyal Victoria Regional Health Centre · CAThe Ohio State University · USUniversity of Turku · FIHelsinki University Hospital · FIMcGill University · CARoyal Victoria Hospital · CATampere University Hospital · FI

Funding

Systems genomics of metabolic syndrome traitsP01HL028481 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REUE, KAREN · 1985 to 2019
$50.2M
Training Grant in Genomic Analysis and InterpretationT32HG002536 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Valerie A Arboleda, Harold Pimentel · 2002 to 2026
$8.6M
Genetic susceptibility to Common Lipid Disorders in MexicoR01HL082762 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PAJUKANTA, PAIVI · 2006 to 2009
$1.4M
NHGRI NIH HHS T32 HG002536NHGRI NIH HHS T32 HG02536NHLBI NIH HHS HL082762NHLBI NIH HHS HL-28481NHLBI NIH HHS P01 HL028481NHLBI NIH HHS R01 HL082762
6 · The paper itself

Abstract

Low serum HDL-cholesterol (HDL-C) is a major risk factor for coronary artery disease. We performed targeted genotyping of a 12.4 Mb linked region on 16q to test for association with low HDL-C by using a regional-tag SNP strategy. We identified one SNP, rs2548861, in the WW-domain-containing oxidoreductase (WWOX) gene with region-wide significance for low HDL-C in dyslipidemic families of Mexican and European descent and in low-HDL-C cases and controls of European descent (p = 6.9 x 10(-7)). We extended our investigation to the population level by using two independent unascertained population-based Finnish cohorts, the cross-sectional METSIM cohort of 4,463 males and the prospective Young Finns cohort of 2,265 subjects. The combined analysis provided p = 4 x 10(-4) to 2 x 10(-5). Importantly, in the prospective cohort, we observed a significant longitudinal association of rs2548861 with HDL-C levels obtained at four different time points over 21 years (p = 0.003), and the T risk allele explained 1.5% of the variance in HDL-C levels. The rs2548861 resides in a highly conserved region in intron 8 of WWOX. Results from our in vitro reporter assay and electrophoretic mobility-shift assay demonstrate that this region functions as a cis-regulatory element whose associated rs2548861 SNP has a specific allelic effect and that the region forms an allele-specific DNA-nuclear-factor complex. In conclusion, analyses of 9,798 subjects show significant association between HDL-C and a WWOX variant with an allele-specific cis-regulatory function.

Indexed as

AdolescentAdultAgedAllelesCardiovascular DiseasesChildChild, PreschoolCholesterol, HDLCohort StudiesFemaleFinlandGenetics, PopulationHumansMaleMexicoMiddle AgedCholesterol, HDLOxidoreductasesTumor Suppressor ProteinsWW Domain-Containing OxidoreductaseWWOX protein, human

Identifiers

PMID18674750
PMCPMC2495060
OpenAlexW2016165461

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.