Evidence map›Paper›PMID 18673548›Full record

ArticleBMC neuroscience2008

Temporal gene expression profiling reveals CEBPD as a candidate regulator of brain disease in prosaposin deficient mice.

Ying Sun, Li Jia, Michael T Williams, Matt Zamzow, Huimin Ran, Brian Quinn, Bruce J Aronow, Charles V Vorhees, David P Witte, Gregory A Grabowski

Open access · goldAbstract read
In one paragraph

Article in BMC neuroscience, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ying SunDivision of Human Genetics, Cincinnati Children's Hospital Medical Center, 3333 Burnet Avenue, MLC 4006, Cincinnati, OH, USA. ying.sun@cchmc.org
Li Jia
Michael T Williams
Matt Zamzow
Huimin Ran
Brian Quinn
Bruce J Aronow
Charles V Vorhees
David P Witte
Gregory A Grabowski
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati Medical Center · US

Funding

Studies of Prosaposin's Physiologic RoleR01NS036681 · NINDS · CINCINNATI CHILDRENS HOSP MED CTR · PI GRABOWSKI, GREGORY A. · 1997 to 2007
$2.6M
NIDDK NIH HHS R01 NS/DK 36681NINDS NIH HHS R01 NS036681
6 · The paper itself

Abstract

backgroundProsaposin encodes, in tandem, four small acidic activator proteins (saposins) with specificities for glycosphingolipid (GSL) hydrolases in lysosomes. Extensive GSL storage occurs in various central nervous system regions in mammalian prosaposin deficiencies.

resultsOur hypomorphic prosaposin deficient mouse, PS-NA, exhibited 45% WT levels of brain saposins and showed neuropathology that included neuronal GSL storage and Purkinje cell loss. Impairment of neuronal function was observed as early as 6 wks as demonstrated by the narrow bridges tests. Temporal transcriptome microarray analyses of brain tissues were conducted with mRNA from three prosaposin deficient mouse models: PS-NA, prosaposin null (PS-/-) and a V394L/V394L glucocerebrosidase mutation combined with PS-NA (4L/PS-NA). Gene expression alterations in cerebrum and cerebellum were detectable at birth preceding the neuronal deficits. Differentially expressed genes encompassed a broad spectrum of cellular functions. The number of down-regulated genes was constant, but up-regulated gene numbers increased with age. CCAAT/enhancer-binding protein delta (CEBPD) was the only up-regulated transcription factor in these two brain regions of all three models. Network analyses revealed that CEBPD has functional relationships with genes in transcription, pro-inflammation, cell death, binding, myelin and transport.

conclusionThese results show that: 1) Regionally specific gene expression abnormalities precede the brain histological and neuronal function changes, 2) Temporal gene expression profiles provide insights into the molecular mechanism during the GSL storage disease course, and 3) CEBPD is a candidate regulator of brain disease in prosaposin deficiency to participate in modulating disease acceleration or progression.

Indexed as

Gene Expression ProfilingAge FactorsAnimalsBrain DiseasesCCAAT-Enhancer-Binding Protein-deltaCerebellumCerebrumCluster AnalysisDisease Models, AnimalDown-RegulationGenes, RegulatorGlucosylceramidaseImmunohistochemistryMiceMice, KnockoutMicroarray AnalysisCCAAT-Enhancer-Binding Protein-deltaCebpd protein, mouseGlucosylceramidasePsap protein, mouseRNA, MessengerSaposins

Identifiers

PMID18673548
PMCPMC2518924
OpenAlexW1994178745

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.