Evidence map›Paper›PMID 18669631›Full record

ArticleThe Journal of biological chemistry2008

FE(II) is the native cofactor for Escherichia coli methionine aminopeptidase.

Sergio C Chai, Wen-Long Wang, Qi-Zhuang Ye

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. During Oxidative Stress the Clp Proteins ofJournal of bacteriology · 2020
    Article
  5. Article
  6. Article
  7. Article
  8. Advances in Bacterial Methionine Aminopeptidase Inhibition.Current topics in medicinal chemistry · 2016
    Review
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Sergio C ChaiDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA.
Wen-Long Wang
Qi-Zhuang Ye
Indiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

Antibacterial methionine aminopeptidase inhibitorsR01AI065898 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI YE, QI-ZHUANG · 2005 to 2009
$2.0M
Antibacterial Methionine Aminopeptidase InhibitorsR56AI065898 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI YE, QI-ZHUANG · 2010 to 2010
$385k
NIAID NIH HHS AI065898
6 · The paper itself

Abstract

Divalent metal ions play a critical role in the removal of N-terminal methionine from nascent proteins by methionine aminopeptidase (MetAP). Being an essential enzyme for bacteria, MetAP is an appealing target for the development of novel antibacterial drugs. Although purified enzyme can be activated by several divalent metal ions, the exact metal ion used by MetAP in cells is unknown. Many MetAP inhibitors are highly potent on purified enzyme, but they fail to show significant inhibition of bacterial growth. One possibility for the failure is a disparity of the metal used in activation of purified MetAP and the metal actually used by MetAP inside bacterial cells. Therefore, the challenge is to elucidate the physiologically relevant metal for MetAP and discover MetAP inhibitors that can effectively inhibit cellular MetAP. We have recently discovered MetAP inhibitors with selectivity toward different metalloforms of Escherichia coli MetAP, and with these unique inhibitors, we characterized their inhibition of MetAP enzyme activity in a cellular environment. We observed that only inhibitors that are selective for the Fe(II)-form of MetAP were potent in this assay. Further, we found that only these Fe(II)-form selective inhibitors showed significant inhibition of growth of five E. coli strains and two Bacillus strains. We confirmed their cellular target as MetAP by analysis of N-terminal processed and unprocessed recombinant glutathione S-transferase proteins. Therefore, we conclude that Fe(II) is the likely metal used by MetAP in E. coli and other bacterial cells.

Indexed as

AminopeptidasesBacillusCations, DivalentCoenzymesEnzyme ActivationEscherichia coliEscherichia coli ProteinsGlutathione TransferaseIronMetalloproteasesMethionyl AminopeptidasesProtease InhibitorsProtein Processing, Post-TranslationalAminopeptidasesCations, DivalentCoenzymesEscherichia coli ProteinsGlutathione TransferaseIronMetalloproteasesMethionyl AminopeptidasesProtease Inhibitors

Identifiers

PMID18669631
PMCPMC2556001
OpenAlexW2054910277

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.