Evidence map›Paper›PMID 18665838›Full record

ArticleBritish journal of haematology2008

Haem-regulated eIF2alpha kinase is necessary for adaptive gene expression in erythroid precursors under the stress of iron deficiency.

Sijin Liu, Sanchita Bhattacharya, Anping Han, Rajasekhar N V S Suragani, Wanting Zhao, Rebecca C Fry, Jane-Jane Chen

Open access · bronzeAbstract read
In one paragraph

Article in British journal of haematology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
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  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. The eIF2α kinases: their structures and functions.Cellular and molecular life sciences : CMLS · 2013
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Iron metabolism: interactions with normal and disordered erythropoiesis.Cold Spring Harbor perspectives in medicine · 2012
    Review
  19. Article
  20. Heme controls the regulation of protein tyrosine kinases Jak2 and Src.Biochemical and biophysical research communications · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sijin LiuHarvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Sanchita Bhattacharya
Anping Han
Rajasekhar N V S Suragani
Wanting Zhao
Rebecca C Fry
Jane-Jane Chen
Harvard–MIT Division of Health Sciences and Technology · USLawrence Berkeley National Laboratory · USMassachusetts Institute of Technology · US

Funding

REGULATION OF PROTEIN SYNTHESIS AND ERYTHROPOIESISR01DK016272 · NIDDK · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHEN, JANE-JANE · 1986 to 2007
$2.3M
Regulation of Protein Synthesis and ErythropoiesisR56DK016272 · NIDDK · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHEN, JANE-JANE · 2008 to 2008
$68k
NIDDK NIH HHS DK16272NIDDK NIH HHS R01 DK016272NIDDK NIH HHS R56 DK016272
6 · The paper itself

Abstract

Haem-regulated eIF2alpha kinase (HRI) is essential for the regulation of globin gene translation and the survival of erythroid precursors in iron/haem deficiency. This study found that that in iron deficiency, fetal definitive erythropoiesis is inhibited at the basophilic erythroblast stage with increased proliferation and elevated apoptosis. This hallmark of ineffective erythropoiesis is more severe in HRI deficiency. Microarray gene profiling analysis showed that HRI was required for adaptive gene expression in erythroid precursors during chronic iron deficiency. The number of genes with expression affected more than twofold increased, from 213 in iron deficiency and 73 in HRI deficiency, to 3135 in combined iron and HRI deficiencies. Many of these genes are regulated by Gata1 and Fog1. We demonstrate for the first time that Gata1 expression in developing erythroid precursors is decreased in iron deficiency, and is decreased further in combined iron and HRI deficiencies. Additionally, Fog1 expression is decreased in combined deficiencies, but not in iron or HRI deficiency alone. Our results indicate that HRI confers adaptive gene expression in developing erythroblasts during iron deficiency through maintaining Gata1/Fog1 expression.

Indexed as

Gene Expression Regulation, EnzymologicAnemia, Iron-DeficiencyAnimalsApoptosisBlotting, WesternCell DifferentiationCells, CulturedeIF-2 KinaseErythropoiesisFlow CytometryGATA1 Transcription FactorGene ExpressionGene Expression ProfilingHemeHumansLivereIF-2 KinaseGATA1 protein, humanGATA1 Transcription FactorHemeNuclear ProteinsRNA, MessengerTranscription FactorsZFPM1 protein, human

Identifiers

PMID18665838
PMCPMC5072281
OpenAlexW2135367084

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.