Evidence map›Paper›PMID 18663023›Full record

ArticleAntimicrobial agents and chemotherapy2008

R chi-01, a new family of oxazolidinones that overcome ribosome-based linezolid resistance.

Eugene Skripkin, Timothy S McConnell, Joseph DeVito, Laura Lawrence, Joseph A Ippolito, Erin M Duffy, Joyce Sutcliffe, François Franceschi

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Antibiotics targeting bacterial ribosomal subunit biogenesis.The Journal of antimicrobial chemotherapy · 2020
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Targeting Antibiotic Resistance.Angewandte Chemie (International ed. in English) · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Pipeline of Known Chemical Classes of Antibiotics.Antibiotics (Basel, Switzerland) · 2013
    Review
  16. Review
  17. Article
  18. Review
  19. Current updates on oxazolidinone and its significance.International journal of medicinal chemistry · 2012
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Eugene SkripkinRib-X Pharmaceuticals, Inc., 300 George Street, Suite 301, New Haven, CT 06511, USA.
Timothy S McConnell
Joseph DeVito
Laura Lawrence
Joseph A Ippolito
Erin M Duffy
Joyce Sutcliffe
François Franceschi
Melinta Therapeutics (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

New and improved antibiotics are urgently needed to combat the ever-increasing number of multidrug-resistant bacteria. In this study, we characterized several members of a new oxazolidinone family, R chi-01. This antibiotic family is distinguished by having in vitro and in vivo activity against hospital-acquired, as well as community-acquired, pathogens. We compared the 50S ribosome binding affinity of this family to that of the only marketed oxazolidinone antibiotic, linezolid, using chloramphenicol and puromycin competition binding assays. The competition assays demonstrated that several members of the R chi-01 family displace, more effectively than linezolid, compounds known to bind to the ribosomal A site. We also monitored binding by assessing whether R chi-01 compounds protect U2585 (Escherichia coli numbering), a nucleotide that influences peptide bond formation and peptide release, from chemical modification by carbodiimide. The R chi-01 oxazolidinones were able to inhibit translation of ribosomes isolated from linezolid-resistant Staphylococcus aureus at submicromolar concentrations. This improved binding corresponds to greater antibacterial activity against linezolid-resistant enterococci. Consistent with their ribosomal A-site targeting and greater potency, the R chi-01 compounds promote nonsense suppression and frameshifting to a greater extent than linezolid. Importantly, the gain in potency does not impact prokaryotic specificity as, like linezolid, the members of the R chi-01 family show translation 50% inhibitory concentrations that are at least 100-fold higher for eukaryotic than for prokaryotic ribosomes. This new family of oxazolidinones distinguishes itself from linezolid by having greater intrinsic activity against linezolid-resistant isolates and may therefore offer clinicians an alternative to overcome linezolid resistance. A member of the R chi-01 family of compounds is currently undergoing clinical trials.

Indexed as

AcetamidesAnti-Bacterial AgentsBinding, CompetitiveBinding SitesDrug Resistance, Multiple, BacterialHumansLinezolidMicrobial Sensitivity TestsOxazolidinonesProtein BiosynthesisRibosomesRNA, BacterialRNA, Ribosomal, 23SStaphylococcus aureusAcetamidesAnti-Bacterial AgentsLinezolidOxazolidinonesRNA, BacterialRNA, Ribosomal, 23S

Identifiers

PMID18663023
PMCPMC2565890
OpenAlexW2099402621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.