Evidence map›Paper›PMID 18663002›Full record

ArticleInfection and immunity2008

Differential expression of a putative CarD-like transcriptional regulator, LtpA, in Borrelia burgdorferi.

X Frank Yang, Martin S Goldberg, Ming He, Haijun Xu, Jon S Blevins, Michael V Norgard

Abstract read
In one paragraph

Article in Infection and immunity, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Lyme Disease Pathogenesis.Current issues in molecular biology · 2021
    Review
  6. Article
  7. Article
  8. Article
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  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

X Frank YangDepartment of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA.
Martin S Goldberg
Ming He
Haijun Xu
Jon S Blevins
Michael V Norgard
The University of Texas Southwestern Medical Center · USIndiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

MOLECULAR MICROBIOLOGY TRAINING GRANTT32AI007520 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Julie K Pfeiffer · 1997 to 2026
$7.0M
The RpoN-RpoS regulatory pathway in Borrelia burgdorferiR01AI059062 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI NORGARD, MICHAEL V. · 2004 to 2019
$6.2M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR015481 · NCRR · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI FIFE, ROSE S · 2001 to 2001
$1.6M
The RpoN-RpoS regulatory pathway in Borrelia burgdorferiR56AI059062 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI NORGARD, MICHAEL V. · 2009 to 2009
$323k
New genetic approaches analyzing Borrelia burgdorferiF32AI058487 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI BLEVINS, JON SCOTT · 2005 to 2007
$111k
NCRR NIH HHS C06 RR015481NCRR NIH HHS C06 RR015481-01NIAID NIH HHS AI-59062NIAID NIH HHS F32 AI058487NIAID NIH HHS F32-AI058487NIAID NIH HHS R01 AI059062NIAID NIH HHS R56 AI059062NIAID NIH HHS T32 AI007520NIAID NIH HHS T32-AI07520
6 · The paper itself

Abstract

The availability of microbial genome information has provided a fruitful opportunity for studying regulatory networks in a variety of pathogenic bacteria. In an initial effort to elucidate regulatory networks potentially involved in differential gene expression by the Lyme disease pathogen Borrelia burgdorferi, we have been investigating the functions and regulation of putative transcriptional regulatory factors predicted to be encoded within the B. burgdorferi genome. Herein we report the regulation of one of the predicted transcriptional regulators, LtpA (BB0355), which is homologous to the transcriptional regulator CarD from Myxococcus xanthus. LtpA expression was assessed in response to various environmental stimuli. Immunoblot and quantitative reverse transcription-PCR analyses revealed that unlike many well-characterized differentially regulated Borrelia genes whose expression is induced by elevated temperature, the expression of LtpA was significantly downregulated when spirochetes were grown at an elevated temperature (37 degrees C), as well as when the bacteria were cultivated in a mammalian host-adapted environment. In contrast, LtpA was induced at a lower culture temperature (23 degrees C). Further analyses indicated that the downregulation of LtpA was not dependent on the Rrp2-RpoN-RpoS regulatory pathway, which is involved in the downregulation of OspA when B. burgdorferi is grown in a mammalian host-adapted environment. LtpA protein levels in B. burgdorferi were unaltered in response to changes in the pH in the borrelial cultures. Multiple attempts to generate an LtpA-deficient mutant were unsuccessful, which has hampered the elucidation of its role in pathogenesis. Given that LtpA is exclusively expressed during borrelial cultivation at a lower temperature, a parameter that has been widely used as a surrogate condition to mimic B. burgdorferi in unfed (flat) ticks, and because LtpA is homologous to a known transcriptional regulator, we postulate that LtpA functions as a regulator modulating the expression of genes important to B. burgdorferi's survival within its arthropod vector.

Indexed as

Gene Expression Regulation, BacterialBorrelia burgdorferiGene DeletionGene Expression ProfilingGenes, BacterialGenes, EssentialHydrogen-Ion ConcentrationImmunoblottingMyxococcus xanthusReverse Transcriptase Polymerase Chain ReactionRNA, BacterialRNA, MessengerSequence Homology, Amino AcidTemperatureTranscription FactorsRNA, BacterialRNA, MessengerTranscription Factors

Identifiers

PMID18663002
PMCPMC2546836
OpenAlexW2150844643

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.