Evidence map›Paper›PMID 18658254›Full record

ArticleEukaryotic cell2008

Characterization of an Entamoeba histolytica high-mobility-group box protein induced during intestinal infection.

Mayuresh M Abhyankar, Amelia E Hochreiter, Jessica Hershey, Clive Evans, Yan Zhang, Oswald Crasta, Bruno W S Sobral, Barbara J Mann, William A Petri, Carol A Gilchrist

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Telomeric Repeat-Binding Factor Homologs inFrontiers in cellular and infection microbiology · 2018
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Emerging functions of transcription factors in malaria parasite.Journal of biomedicine & biotechnology · 2011
    Review
  12. Regulation of gene expression in protozoa parasites.Journal of biomedicine & biotechnology · 2010
    Review
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Mayuresh M AbhyankarDepartments of Medicine, University of Virginia, Charlottesville, VA 22908-1340, USA.
Amelia E Hochreiter
Jessica Hershey
Clive Evans
Yan Zhang
Oswald Crasta
Bruno W S Sobral
Barbara J Mann
William A Petri
Carol A Gilchrist
Virginia Tech · USUniversity of Virginia · US

Funding

GENE EXPRESSION IN ENTAMOEBA HISTOLYTICAR01AI037941 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PETRI, WILLIAM A · 1996 to 2008
$2.3M
NIAID NIH HHS AI-37941NIAID NIH HHS R01 AI037941
6 · The paper itself

Abstract

The unicellular eukaryote Entamoeba histolytica is a human parasite that causes amebic dysentery and liver abscess. A genome-wide analysis of gene expression modulated by intestinal colonization and invasion identified an upregulated transcript that encoded a putative high-mobility-group box (HMGB) protein, EhHMGB1. We tested if EhHMGB1 encoded a functional HMGB protein and determined its role in control of parasite gene expression. Recombinant EhHMGB1 was able to bend DNA in vitro, a characteristic of HMGB proteins. Core conserved residues required for DNA bending activity in other HMGB proteins were demonstrated by mutational analysis to be essential for EhHMGB1 activity. EhHMGB1 was also able to enhance the binding of human p53 to its cognate DNA sequence in vitro, which is expected for an HMGB1 protein. Confocal microscopy, using antibodies against the recombinant protein, confirmed its nuclear localization. Overexpression of EhHMGB1 in HM1:IMSS trophozoites led to modulation of 33 transcripts involved in a variety of cellular functions. Of these, 20 were also modulated at either day 1 or day 29 in the mouse model of intestinal amebiasis. Notably, four transcripts with known roles in virulence, including two encoding Gal/GalNAc lectin light chains, were modulated in response to EhHMGB1 overexpression. We concluded that EhHMGB1 was a bona fide HMGB protein with the capacity to recapitulate part of the modulation of parasite gene expression seen during adaptation to the host intestine.

Indexed as

Gene Expression RegulationAmino Acid SequenceAnimalsCell NucleusDysentery, AmebicEntamoeba histolyticaGene Expression ProfilingHeLa CellsHMGB ProteinsHumansIntestinal MucosaIntestinesMolecular Sequence DataOligonucleotide Array Sequence AnalysisProtein BindingProtein TransportHMGB ProteinsProtozoan ProteinsTumor Suppressor Protein p53

Identifiers

PMID18658254
PMCPMC2547075
OpenAlexW2106648515

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.