Evidence map›Paper›PMID 18655705›Full record

ArticleBMC evolutionary biology2008

An amphioxus orthologue of the estrogen receptor that does not bind estradiol: insights into estrogen receptor evolution.

Mathilde Paris, Katarina Pettersson, Michael Schubert, Stephanie Bertrand, Ingemar Pongratz, Hector Escriva, Vincent Laudet

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC evolutionary biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
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  3. Bisphenol A affects the pulse rate of Lumbriculus variegatus via an estrogenic mechanism.Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2021
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  12. Evolutionary origins of the estrogen signaling system: insights from amphioxus.The Journal of steroid biochemistry and molecular biology · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Mathilde ParisInstitut de Génomique Fonctionnelle de Lyon, Molecular Zoology team, Université de Lyon, Ecole Normale Supérieure de Lyon, Université Lyon 1, CNRS, INRA, Institut Fédératif 128 Biosciences Gerland Lyon Sud, France. mathilde.paris@ens-lyon.fr
Katarina Pettersson
Michael Schubert
Stephanie Bertrand
Ingemar Pongratz
Hector Escriva
Vincent Laudet
Karolinska Institutet · SEObservatoire Océanologique de Banyuls-sur-Mer · FRCentre National de la Recherche Scientifique · FRÉcole Normale Supérieure de Lyon · FRInstitut de Génomique Fonctionnelle de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe origin of nuclear receptors (NRs) and the question whether the ancestral NR was a liganded or an unliganded transcription factor has been recently debated. To obtain insight into the evolution of the ligand binding ability of estrogen receptors (ER), we comparatively characterized the ER from the protochordate amphioxus (Branchiostoma floridae), and the ER from lamprey (Petromyzon marinus), a basal vertebrate.

resultsExtensive phylogenetic studies as well as signature analysis allowed us to confirm that the amphioxus ER (amphiER) and the lamprey ER (lampER) belong to the ER group. LampER behaves as a "classical" vertebrate ER, as it binds to specific DNA Estrogen Responsive Elements (EREs), and is activated by estradiol (E2), the classical ER natural ligand. In contrast, we found that although amphiER binds EREs, it is unable to bind E2 and to activate transcription in response to E2. Among the 7 natural and synthetic ER ligands tested as well as a large repertoire of 14 cholesterol derivatives, only Bisphenol A (an endocrine disruptor with estrogenic activity) bound to amphiER, suggesting that a ligand binding pocket exists within the receptor. Parsimony analysis considering all available ER sequences suggest that the ancestral ER was not able to bind E2 and that this ability evolved specifically in the vertebrate lineage. This result does not support a previous analysis based on ancestral sequence reconstruction that proposed the ancestral steroid receptor to bind estradiol. We show that biased taxonomic sampling can alter the calculation of ancestral sequence and that the previous result might stem from a high proportion of vertebrate ERs in the dataset used to compute the ancestral sequence.

conclusionTaken together, our results highlight the importance of comparative experimental approaches vs ancestral reconstructions for the evolutionary study of endocrine systems: comparative analysis of extant ERs suggests that the ancestral ER did not bind estradiol and that it gained the ability to be regulated by estradiol specifically in the vertebrate lineage, before lamprey split.

Indexed as

Evolution, MolecularAmino Acid SequenceAnimalsBenzhydryl CompoundsBisphenol A CompoundsCell LineChordata, NonvertebrateCloning, MolecularEstradiolGenes, ReporterHumansMolecular Sequence DataPetromyzonPhenolsPhylogenyReceptors, EstrogenBenzhydryl Compoundsbisphenol ABisphenol A CompoundsEstradiolPhenolsReceptors, Estrogen

Identifiers

PMID18655705
PMCPMC2529310
OpenAlexW2112816468

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.