Evidence map›Paper›PMID 18655144›Full record

ArticleBiopolymers2008

Three-dimensional consensus structure of sst2-selective somatostatin (SRIF) antagonists by NMR.

Christy Rani R Grace, Judit Erchegyi, Jean Claude Reubi, Jean E Rivier, Roland Riek

Abstract read
In one paragraph

Article in Biopolymers, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Christy Rani R GraceStructural Biology Laboratory, The Salk Institute for Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037, USA.
Judit Erchegyi
Jean Claude Reubi
Jean E Rivier
Roland Riek

Funding

Somatostatin Receptor-Selective Agonists and AntagonistsR01DK059953 · NIDDK · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI RIVIER, JEAN E · 2002 to 2006
$2.3M
NIDDK NIH HHS DK059953NIDDK NIH HHS R01 DK059953
6 · The paper itself

Abstract

The three-dimensional NMR structures of seven octapeptide analogs of somatostatin (SRIF), based on octreotide, with the basic sequence H-Cpa/Phe2-c[DCys3-Xxx7-DTrp/DAph(Cbm)8-Lys9-Thr10-Cys14]-Yyy-NH2 (the numbering refers to the position in native SRIF), with Xxx7 being Aph(Cbm)/Tyr/Agl(NMe,benzoyl) and Yyy being Nal/DTyr/Thr, are presented here. Most of these analogs exhibit potent and highly selective binding to sst2 receptors, and all of the analogs are antagonists inhibiting receptor signaling. Based on their consensus 3D structure, the pharmacophore of the sst2-selective antagonist has been defined. The pharmacophore involves the side chains of Cpa2, DTrp/DAph(Cbm)8, and Lys9, with the backbone for most of the sst2-selective antagonists comprised a Type-II' beta-turn. Hence, the sst2-selective antagonist pharmacophore is very similar to the sst2-selective agonist pharmacophore previously described.

Indexed as

Amino Acid SequenceConsensus SequenceCysteineMagnetic Resonance SpectroscopyModels, MolecularOligopeptidesProtein ConformationReceptors, SomatostatinSodium IodideSomatostatinStructure-Activity RelationshipThreonineCysteineOligopeptidesReceptors, SomatostatinSodium IodideSomatostatinThreonine

Identifiers

PMID18655144
PMCPMC2789648

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.