Evidence map›Paper›PMID 18654634›Full record

ArticlePLoS genetics2008

Positional cloning of "Lisch-Like", a candidate modifier of susceptibility to type 2 diabetes in mice.

Marija Dokmanovic-Chouinard, Wendy K Chung, Jean-Claude Chevre, Elizabeth Watson, Jason Yonan, Beebe Wiegand, Yana Bromberg, Nao Wakae, Chris V Wright, John Overton and 9 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. ILDR2 Is a Novel B7-like Protein That Negatively Regulates T Cell Responses.Journal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  6. Article
  7. Article
  8. A Novel p.G141R Mutation inNeural plasticity · 2018
    Article
  9. Review
  10. Retinoic acid receptor signaling is required to maintain glucose-stimulated insulin secretion and β-cell mass.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2015
    Article
  11. Article
  12. The genetic basis of obesity-associated type 2 diabetes (diabesity) in polygenic mouse models.Mammalian genome : official journal of the International Mammalian Genome Society · 2014
    Review
  13. Review
  14. Review
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Marija Dokmanovic-ChouinardNaomi Berrie Diabetes Center, Columbia University, New York, New York, USA.
Wendy K Chung
Jean-Claude Chevre
Elizabeth Watson
Jason Yonan
Beebe Wiegand
Yana Bromberg
Nao Wakae
Chris V Wright
John Overton
Sujoy Ghosh
Ganesh M Sathe
Carina E Ammala
Kathleen K Brown
Rokuro Ito
Charles LeDuc
Keely Solomon
Stuart G Fischer
Rudolph L Leibel
Columbia University · USGlaxoSmithKline (United States) · USResearch Triangle Park Foundation · USVanderbilt University · US

Funding

Translational Biomarker Analytical Core (TBAC)P30DK063608 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DOMENICO ACCILI · 2003 to 2026
$36.7M
The molecular genetic analysis of human obesityR01DK052431 · NIDDK · ROCKEFELLER UNIVERSITY · PI CHUNG, WENDY K, LEIBEL, RUDOLPH L · 1996 to 2020
$11.6M
Cloning of a type 2 diabetes modifier in obese miceR01DK066518 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LEIBEL, RUDOLPH L · 2003 to 2011
$4.2M
NIDDK NIH HHS 5P30DK063608NIDDK NIH HHS 5T32DK007599-18NIDDK NIH HHS P30 DK063608NIDDK NIH HHS R01 DK052431NIDDK NIH HHS R01 DK066518NIDDK NIH HHS R01-DK66518
6 · The paper itself

Abstract

In 404 Lep(ob/ob) F2 progeny of a C57BL/6J (B6) x DBA/2J (DBA) intercross, we mapped a DBA-related quantitative trait locus (QTL) to distal Chr1 at 169.6 Mb, centered about D1Mit110, for diabetes-related phenotypes that included blood glucose, HbA1c, and pancreatic islet histology. The interval was refined to 1.8 Mb in a series of B6.DBA congenic/subcongenic lines also segregating for Lep(ob). The phenotypes of B6.DBA congenic mice include reduced beta-cell replication rates accompanied by reduced beta-cell mass, reduced insulin/glucose ratio in blood, reduced glucose tolerance, and persistent mild hypoinsulinemic hyperglycemia. Nucleotide sequence and expression analysis of 14 genes in this interval identified a predicted gene that we have designated "Lisch-like" (Ll) as the most likely candidate. The gene spans 62.7 kb on Chr1qH2.3, encoding a 10-exon, 646-amino acid polypeptide, homologous to Lsr on Chr7qB1 and to Ildr1 on Chr16qB3. The largest isoform of Ll is predicted to be a transmembrane molecule with an immunoglobulin-like extracellular domain and a serine/threonine-rich intracellular domain that contains a 14-3-3 binding domain. Morpholino knockdown of the zebrafish paralog of Ll resulted in a generalized delay in endodermal development in the gut region and dispersion of insulin-positive cells. Mice segregating for an ENU-induced null allele of Ll have phenotypes comparable to the B.D congenic lines. The human ortholog, C1orf32, is in the middle of a 30-Mb region of Chr1q23-25 that has been repeatedly associated with type 2 diabetes.

Indexed as

Genetic Predisposition to DiseaseAmino Acid SequenceAnimalsBase SequenceBlood GlucoseChromosomes, MammalianCloning, MolecularCrosses, GeneticDiabetes Mellitus, ExperimentalDiabetes Mellitus, Type 2Glucose Tolerance TestHaplotypesHomozygoteInsulinMaleMiceBlood GlucoseInsulinlisch-like protein, mouseProtein IsoformsReceptors, Cell Surface

Identifiers

PMID18654634
PMCPMC2464733
OpenAlexW2056021994

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.