Evidence map›Paper›PMID 18653731›Full record

ArticleMolecular biology and evolution2008

Recent origins of sperm genes in Drosophila.

Steve Dorus, Zoë N Freeman, Elizabeth R Parker, Benjamin D Heath, Timothy L Karr

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  10. Positive Selection in the Evolution of Mammalian CRISPs.Journal of molecular evolution · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Structure of androcam supports specialized interactions with myosin VI.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  15. Article
  16. Functional evidence that a recently evolved Drosophila sperm-specific gene boosts sperm competition.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  17. Dynamic programming procedure for searching optimal models to estimate substitution rates based on the maximum-likelihood method.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Steve DorusDepartment of Biology and Biochemistry, University of Bath, Bath, United Kingdom.
Zoë N Freeman
Elizabeth R Parker
Benjamin D Heath
Timothy L Karr
University of Bath · GB

Funding

Characterization of the human and mouse sperm proteomesF32GM076913 · NIGMS · UNIVERSITY OF BATH · PI DORUS, STEPHEN · 2006 to 2008
$145k
Biotechnology and Biological Sciences Research CouncilNIGMS NIH HHS F32 GM076913
6 · The paper itself

Abstract

Newly created genes often acquire testis-specific or enhanced expression but neither the mechanisms responsible for this specificity nor the functional consequences of these evolutionary processes are well understood. Genomic analyses of the Drosophila melanogaster sperm proteome has identified 2 recently evolved gene families on the melanogaster lineage and 4 genes created by retrotransposition during the evolution of the melanogaster group that encode novel sperm components. The expanded Mst35B (protamine) and tektin gene families are the result of tandem duplication events with all family members displaying testis-specific expression. The Mst35B family encodes rapidly evolving protamines that display a robust signature of positive selection within the DNA-binding high-mobility group box consistent with functional diversification in genome repackaging during sperm nuclear remodeling. The Mst35B paralogs also reside in a significant regional cluster of testis-overexpressed genes. Tektins, known components of the axoneme, are encoded by 3 nearly identical X-linked genes, a finding consistent with very recent gene family expansion. In addition to localized duplication events, the evolution of the sperm proteome has also been driven by recent retrotransposition events resulting in Cdlc2, CG13340, Vha36, and CG4706. Cdlc2, CG13340, and Vha36 all display high levels of overexpression in the testis, and Cdlc2 and CG13340 reside within testis-overexpressed gene clusters. Thus, gene creation is a dynamic force in the evolution of sperm composition and possibly function, which further suggests that acquisition of molecular functionality in sperm may be an influential pathway in the fixation of new genes.

Indexed as

AnimalsComputational BiologyDNADrosophila melanogasterEvolution, MolecularGene DuplicationGenomeMaleModels, GeneticProtaminesProteomeProteomicsRetroelementsSpermatozoaTestisDNAProtaminesProteomeRetroelements

Identifiers

PMID18653731
PMCPMC2727386
OpenAlexW2004216278

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.