Evidence map›Paper›PMID 18650495›Full record

ArticleBiology of reproduction2008

Mutagenesis is elevated in male germ cells obtained from DNA polymerase-beta heterozygous mice.

Diwi Allen, Damon C Herbert, C Alex McMahan, Vladimir Rotrekl, Robert W Sobol, Samuel H Wilson, Christi A Walter

Open access · bronzeAbstract read
In one paragraph

Article in Biology of reproduction, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. DNA polymerase β suppresses somatic indels at CpG dinucleotides in developing cortical neurons.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Diwi AllenDepartments of Cellular and Structural Biology and Pathology, and The Barshop Center for Longevity and Aging Studies, The University of Texas Health Science Center at San Antonio, San Antonio, Texas 78229, USA.
Damon C Herbert
C Alex McMahan
Vladimir Rotrekl
Robert W Sobol
Samuel H Wilson
Christi A Walter
The University of Texas Health Science Center at San Antonio · USTriangle · USUniversity of Pittsburgh · US

Funding

Biology of Mammalian Base Excision Repair and HIV-1 ReplicationZIAES050159 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILSON, SAMUEL H · 2009 to 2022
$29.7M
BIOLOGY OF MAMMALIAN BASE EXCISION REPAIRZ01ES050159 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WILSON, SAMUEL H · 1997 to 2008
$4.5M
Pilot ResearchP20CA103730 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHATTA, GURKAMAL S · 2003 to 2007
$3.2M
Germ Cell AgingR01AG021163 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI WALTER, CHRISTI A · 2002 to 2007
$1.8M
Base Excision Repair, Genetic Integrity &Health SpanR01AG024364 · NIA · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI WALTER, CHRISTI A · 2004 to 2008
$1.7M
Intramural NIH HHS Z01 ES050159NCI NIH HHS P20 CA103730NIA NIH HHS 1 R01AG24364-01NIA NIH HHS AG21163NIA NIH HHS R01 AG021163NIA NIH HHS R01 AG024364
6 · The paper itself

Abstract

Gametes carry the DNA that will direct the development of the next generation. By compromising genetic integrity, DNA damage and mutagenesis threaten the ability of gametes to fulfill their biological function. DNA repair pathways function in germ cells and serve to ameliorate much DNA damage and prevent mutagenesis. High base excision repair (BER) activity is documented for spermatogenic cells. DNA polymerase-beta (POLB) is required for the short-patch BER pathway. Because mice homozygous null for the Polb gene die soon after birth, mice heterozygous for Polb were used to examine the extent to which POLB contributes to maintaining spermatogenic genomic integrity in vivo. POLB protein levels were reduced only in mixed spermatogenic cells. In vitro short-patch BER activity assays revealed that spermatogenic cell nuclear extracts obtained from Polb heterozygous mice had one third the BER activity of age-matched control mice. Polb heterozygosity had no effect on the BER activities of somatic tissues tested. The Polb heterozygous mouse line was crossed with the lacI transgenic Big Blue mouse line to assess mutant frequency. The spontaneous mutant frequency for mixed spermatogenic cells prepared from Polb heterozygous mice was 2-fold greater than that of wild-type controls, but no significant effect was found among the somatic tissues tested. These results demonstrate that normal POLB abundance is necessary for normal BER activity, which is critical in maintaining a low germline mutant frequency. Notably, spermatogenic cells respond differently than somatic cells to Polb haploinsufficiency.

Indexed as

DNA RepairMutagenesisAnimalsApoptosisBlotting, WesternBrainDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA DamageDNA Ligase ATPDNA LigasesDNA Polymerase betaHeterozygoteLiverMaleMiceApex1 protein, mouseDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA Ligase ATPDNA ligase III alpha protein, XenopusDNA LigasesDNA Polymerase betaPoly-ADP-Ribose Binding ProteinsXenopus ProteinsX-ray Repair Cross Complementing Protein 1

Identifiers

PMID18650495
PMCPMC2679517
OpenAlexW2084369007

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.