Evidence map›Paper›PMID 18650310›Full record

ArticleJournal of neurophysiology2008

Reconfiguration of the pontomedullary respiratory network: a computational modeling study with coordinated in vivo experiments.

I A Rybak, R O'Connor, A Ross, N A Shevtsova, S C Nuding, L S Segers, R Shannon, T E Dick, W L Dunin-Barkowski, J M Orem and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of neurophysiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 108 citations in OpenAlex.

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  10. Breathing rate variability in obstructive sleep apnea during wakefulness.Journal of clinical sleep medicine : JCSM : official publication of the American Academy of Sleep Medicine · 2022
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  11. The sigh and related behaviors.Handbook of clinical neurology · 2022
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  18. Pulmonary Vein Ganglia Are Remodeled in the Diabetic Heart.Journal of the American Heart Association · 2018
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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

I A RybakDepartment of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, PA, USA.
R O'Connor
A Ross
N A Shevtsova
S C Nuding
L S Segers
R Shannon
T E Dick
W L Dunin-Barkowski
J M Orem
I C Solomon
K F Morris
B G Lindsey
University of South Florida · USDrexel University · USTexas Tech University · USStony Brook University · US

Funding

Brainstem Respiratory Neuron InteractionsR37NS019814 · NINDS · UNIVERSITY OF SOUTH FLORIDA · PI LINDSEY, BRUCE G · 2004 to 2010
$3.6M
Spinal Control of Locomotion: Studies and ApplicationsR01NS048844 · NINDS · DREXEL UNIVERSITY · PI RYBAK, ILYA A · 2006 to 2010
$2.2M
Computational Studies of the Respiratory BrainstemR01NS046062 · NINDS · UNIVERSITY OF SOUTH FLORIDA · PI LINDSEY, BRUCE G · 2002 to 2006
$2.1M
CRCNS: State dependent neural mechanisms for respiratory pattern generationR01NS057815 · NINDS · DREXEL UNIVERSITY · PI RYBAK, ILYA A · 2006 to 2010
$1.4M
Modeling of pathogenic breathing pattern dysregulation in cardiopulmonary diseaseR33HL087379 · NHLBI · DREXEL UNIVERSITY · PI RYBAK, ILYA A · 2008 to 2010
$561k
NHLBI NIH HHS R33 HL087379NINDS NIH HHS R01 NS-046062NINDS NIH HHS R01 NS048844NINDS NIH HHS R01 NS-057815NINDS NIH HHS R01 NS057815NINDS NIH HHS R37 NS-019814
6 · The paper itself

Abstract

A large body of data suggests that the pontine respiratory group (PRG) is involved in respiratory phase-switching and the reconfiguration of the brain stem respiratory network. However, connectivity between the PRG and ventral respiratory column (VRC) in computational models has been largely ad hoc. We developed a network model with PRG-VRC connectivity inferred from coordinated in vivo experiments. Neurons were modeled in the "integrate-and-fire" style; some neurons had pacemaker properties derived from the model of Breen et al. We recapitulated earlier modeling results, including reproduction of activity profiles of different respiratory neurons and motor outputs, and their changes under different conditions (vagotomy, pontine lesions, etc.). The model also reproduced characteristic changes in neuronal and motor patterns observed in vivo during fictive cough and during hypoxia in non-rapid eye movement sleep. Our simulations suggested possible mechanisms for respiratory pattern reorganization during these behaviors. The model predicted that network- and pacemaker-generated rhythms could be co-expressed during the transition from gasping to eupnea, producing a combined "burst-ramp" pattern of phrenic discharges. To test this prediction, phrenic activity and multiple single neuron spike trains were monitored in vagotomized, decerebrate, immobilized, thoracotomized, and artificially ventilated cats during hypoxia and recovery. In most experiments, phrenic discharge patterns during recovery from hypoxia were similar to those predicted by the model. We conclude that under certain conditions, e.g., during recovery from severe brain hypoxia, components of a distributed network activity present during eupnea can be co-expressed with gasp patterns generated by a distinct, functionally "simplified" mechanism.

Indexed as

Neural Networks, ComputerAnimalsBrain StemCatsComputer SimulationCoughFeedbackHypoxiaMedulla OblongataModels, NeurologicalMovementNerve NetNeuronsPonsReflexRespiratory Mechanics

Identifiers

PMID18650310
PMCPMC2576193
OpenAlexW1976163772

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.