Evidence map›Paper›PMID 18649182›Full record

ArticleCell communication & adhesion2008

Site-directed mutagenesis reveals putative regions of protein interaction within the transmembrane domains of connexins.

M M Toloue, Y Woolwine, J A Karcz, E M Kasperek, B J Nicholson, I M Skerrett

Open access · greenAbstract readComparative Study
In one paragraph

Article in Cell communication & adhesion, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

M M ToloueDepartment of Biochemistry, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.
Y Woolwine
J A Karcz
E M Kasperek
B J Nicholson
I M Skerrett
Buffalo State University · USThe University of Texas Health Science Center at San Antonio · USUniversity at Albany, State University of New York · USUniversity at Buffalo, State University of New York · US

Funding

SELECTIVE PERMEABILITY &PORE STRUCTURE OF GAP JUNCTIONR01GM055437 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI NICHOLSON, BRUCE J · 1997 to 2009
$2.6M
NIGMS NIH HHS R01 GM055437
6 · The paper itself

Abstract

Through cysteine-scanning mutagenesis, the authors have compared sites within the transmembrane domains of two connexins, one from the alpha-class (Cx50) and one from the beta-class (Cx32), where amino acid substitution disrupts the function of gap junction channels. In Cx32, 11 sites resulted in no channel function, or an aberrant voltage gating phenotype referred to as "reverse gating," whereas in Cx50, 7 such sites were identified. In both connexins, the sites lie along specific faces of transmembrane helices, suggesting that these may be sites of transmembrane domain interactions. In Cx32, one broad face of the M1 transmembrane domain and a narrower, polar face of M3 were identified, including one site that was shown to come into close apposition with M4 in the closed state. In Cx50, the same face of M3 was identified, but sensitive sites in M1 differed from Cx32. Many fewer sites in M1 disrupted channel function in Cx50, and those that did were on a different helical face to the sensitive sites in Cx32. A more in depth study of two sites in M1 and M2 of Cx32 showed that side-chain length or branching are important for maintenance of normal channel behavior, consistent with this being a site of transmembrane domain interaction.

Indexed as

Mutagenesis, Site-DirectedProtein Interaction MappingAmino Acid SequenceAnimalsConnexinsFemaleGap JunctionsMolecular Sequence DataProtein Structure, TertiaryXenopus laevisConnexins

Identifiers

PMID18649182
PMCPMC2673110
OpenAlexW2027490743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.