Evidence map›Paper›PMID 18645515›Full record

ArticleJournal of acquired immune deficiency syndromes (1999)2008

Viral dynamics and in vivo fitness of HIV-1 in the presence and absence of enfuvirtide.

Vincent Marconi, Sebastian Bonhoeffer, Roger Paredes, Jing Lu, Rebecca Hoh, Jeffery N Martin, Steven G Deeks, Daniel R Kuritzkes

Open access · greenAbstract read
In one paragraph

Article in Journal of acquired immune deficiency syndromes (1999), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

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  11. Effect of raltegravir resistance mutations in HIV-1 integrase on viral fitness.Journal of acquired immune deficiency syndromes (1999) · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Vincent MarconiSection of Retroviral Therapeutics, Brigham and Women's Hospital and Division of AIDS, Harvard Medical School, Boston, MA 02139, USA.
Sebastian Bonhoeffer
Roger Paredes
Jing Lu
Rebecca Hoh
Jeffery N Martin
Steven G Deeks
Daniel R Kuritzkes
Harvard University · USBrigham and Women's Hospital · USETH Zurich · CH

Funding

WOMEN'S HEALTH AGENDAU01AI038858 · NIAID · SOCIAL AND SCIENTIFIC SYSTEMS, INC. · PI BENSON, CONSTANCE ANN · 1996 to 2008
$157.5M
The impact of HIV viral diversity and cellular immunity on HIV pathogenesisP30AI060354 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI ROBERT A. PARKER · 2004 to 2026
$94.4M
WELFARE REFORM AND THE PERINATAL HEALTH OF IMMIGRANTSM01RR000083 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KESSLER, DAVID A · 1985 to 2006
$21.1M
UCSF-GIVI CENTER FOR AIDS RESEARCHP30MH059037 · NIMH · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI FEINBERG, MARK A · 1998 to 2001
$4.9M
HIV-1 Resistance to Chemokine Receptor AntagonistsR37AI055357 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI KURITZKES, DANIEL R. · 2007 to 2016
$4.4M
Immunologic Control of Drug-resistant HIV-1R01AI052745 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2002 to 2005
$2.0M
Fitness of Enfuvirtide-(T-20)-Resistant HIV-1R01AI055357 · NIAID · BRIGHAM AND WOMEN'S HOSPITAL · PI KURITZKES, DANIEL R · 2003 to 2006
$1.2M
HIV-1 THERAPEUTICS AND DRUG RESISTANCEK24RR016482 · NCRR · UNIVERSITY OF COLORADO DENVER · PI KURITZKES, DANIEL R. · 2001 to 2010
$1.0M
Treatment Intensification for Drug-Resistant HIVR21AI055273 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2003 to 2004
$454k
NCRR NIH HHS K24 RR016482NCRR NIH HHS M01 RR000083NCRR NIH HHS M01 RR00083NIAID NIH HHS AI-060354NIAID NIH HHS P30 AI060354NIAID NIH HHS R01 AI052745NIAID NIH HHS R01 AI055273NIAID NIH HHS R01 AI055357NIAID NIH HHS R21 AI055273NIAID NIH HHS R37 AI055357NIAID NIH HHS U01 AI038858NIAID NIH HHS U01 AI38858NIMH NIH HHS P30 MH59037
6 · The paper itself

Abstract

objectivesTo estimate the in vivo fitness cost of enfuvirtide (ENF) resistance, we analyzed dynamic shifts in the HIV-1 quasispecies under changing selective pressure in 3 subjects on failing ENF-based regimens who interrupted ENF while maintaining stable background regimens. Subsequently, ENF was readministered for 4 weeks as "pulse intensification."

methodsThe proportion of plasma virus carrying the V38A mutation in gp41 was quantified by allele-specific real-time polymerase chain reaction in serial samples collected from 3 subjects at 1- to 4-week intervals. Fitness differences were calculated using a method that corrected for time dependence of the viral replication rate.

resultsThe V38A mutant made up >or=85% of the quasispecies at baseline and decayed to <5% over 12-24 weeks; plasma HIV-1 RNA levels remained stable during this time. Fitness differences for mutant versus wild type ranged from -25% to -65%, providing in vivo evidence for the reduced fitness of ENF-resistant HIV-1. The V38A mutant virus reemerged rapidly during the ENF pulse.

conclusionsThese results demonstrate that the HIV-1 quasispecies undergoes dynamic changes in response to withdrawal and reinitiation of fusion inhibitor therapy. The relative stability of plasma HIV-1 titers during decay of V38A suggests that factors other than viral fitness likely define viral load set-point in patients with advanced disease.

Indexed as

Drug Resistance, ViralEnfuvirtideHIV-1HIV Envelope Protein gp41HIV Fusion InhibitorsHIV InfectionsHumansMutationPeptide FragmentsViral LoadEnfuvirtideHIV Envelope Protein gp41HIV Fusion InhibitorsPeptide Fragments

Identifiers

PMID18645515
PMCPMC2709806
OpenAlexW1996335506

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.