Evidence map›Paper›PMID 18644870›Full record

ArticleMolecular and cellular biology2008

Cotranscriptional splicing potentiates the mRNA production from a subset of estradiol-stimulated genes.

Danielle Bittencourt, Martin Dutertre, Gabriel Sanchez, Jérôme Barbier, Lise Gratadou, Didier Auboeuf

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. RNA splicing regulates the temporal order of TNF-induced gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Cotranscriptional exon skipping in the genotoxic stress response.Nature structural & molecular biology · 2010
    Article
  13. Review
  14. Article
  15. Where splicing joins chromatin.Nucleus (Austin, Tex.)
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Danielle BittencourtINSERM U685, Institut Universitaire d'Hematologie, Hopital Saint-Louis, 1 Avenue Claude Vellefaux, 75010 Paris, France.
Martin Dutertre
Gabriel Sanchez
Jérôme Barbier
Lise Gratadou
Didier Auboeuf
Inserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While early steps of gene expression, such as transcription preinitiation, are known to often be rate limiting and to be regulated by such stimuli as steroid hormones, the potential impact of downstream steps, including splicing, on the mRNA production rate is unknown. In this work, we studied the effects of the transcriptional stimulus estradiol on cyclin D1, PS2, and c-fos gene expression by measuring the levels of RNA polymerase II on the DNA templates, the levels of nascent transcripts associated with RNA polymerase II, and the levels of unspliced, partially spliced, and fully spliced RNAs. We demonstrated that the efficiency of cotranscriptional splicing of the first intron was higher in the case of cyclin D1 than with PS2 and potentiated the cyclin D1 mRNA production rate. The mechanism involved in cotranscriptional splicing depended on the level of serine 5 phosphorylation of RNA polymerase II at the gene 5' end and on the recruitment of CBP80, one of the two subunits of the cap binding complex, which stimulates splicing of the promoter-proximal intron. Our data indicate that mRNA production from a subset of estradiol-stimulated genes, such as cyclin D1, could occur in a very efficient "assembly line." In contrast, we demonstrated for the first time that despite a strong transcriptional activation of the PS2 gene, the production of mRNA is not optimized owing to inefficient cotranscriptional RNA processing.

Indexed as

Cyclin D1Proto-Oncogene Proteins c-fosRNA SplicingTumor Suppressor ProteinsAnimalsCell LineEstradiolGene Expression RegulationHumansIntronsRNA, MessengerRNA Polymerase IISerineTranscription, GeneticTrefoil Factor-1Cyclin D1EstradiolProto-Oncogene Proteins c-fosRNA, MessengerRNA Polymerase IISerineTFF1 protein, humanTrefoil Factor-1Tumor Suppressor Proteins

Identifiers

PMID18644870
PMCPMC2546936
OpenAlexW2127763580

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.