Evidence map›Paper›PMID 18641659›Full record

ArticleNature medicine2008

A membrane protein preserves intrabacterial pH in intraphagosomal Mycobacterium tuberculosis.

Omar H Vandal, Lynda M Pierini, Dirk Schnappinger, Carl F Nathan, Sabine Ehrt

Abstract read
In one paragraph

Article in Nature medicine, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 211 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
211citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

211 citing papers in PubMed, 1 synthesis or guideline pooled it, 361 citations in OpenAlex.

  1. Pooled it
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  14. Pyrazinamide killsbioRxiv : the preprint server for biology · 2025
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  16. Journal of bacteriology · 2025
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  18. Journal of bacteriology · 2025
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  19. Science advances · 2025
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  20. Article

151 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Omar H VandalDepartment of Microbiology, Weill Cornell Medical College, 1300 York Avenue, New York, New York 10065, USA.
Lynda M Pierini
Dirk Schnappinger
Carl F Nathan
Sabine Ehrt
Cornell University · US

Funding

MACROPHAGES, DENDRITIC CELLS AND PATHOGENSP01AI056293 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI NATHAN, CARL F · 2003 to 2007
$6.2M
NIAID NIH HHS P01 AI056293
6 · The paper itself

Abstract

Acidification of the phagosome is considered to be a major mechanism used by macrophages against bacteria, including Mycobacterium tuberculosis (Mtb). Mtb blocks phagosome acidification, but interferon-gamma (IFN-gamma) restores acidification and confers antimycobacterial activity. Nonetheless, it remains unclear whether acid kills Mtb, whether the intrabacterial pH of any pathogen falls when it is in the phagosome and whether acid resistance is required for mycobacterial virulence. In vitro at pH 4.5, Mtb survived in a simple buffer and maintained intrabacterial pH. Therefore, Mtb resists phagolysosomal concentrations of acid. Mtb also maintained its intrabacterial pH and survived when phagocytosed by IFN-gamma-activated macrophages. We used transposon mutagenesis to identify genes responsible for Mtb's acid resistance. A strain disrupted in Rv3671c, a previously uncharacterized gene encoding a membrane-associated protein, was sensitive to acid and failed to maintain intrabacterial pH in acid in vitro and in activated macrophages. Growth of the mutant was also severely attenuated in mice. Thus, Mtb is able to resist acid, owing in large part to Rv3671c, and this resistance is essential for virulence. Disruption of Mtb's acid resistance and intrabacterial pH maintenance systems is an attractive target for chemotherapy.

Indexed as

AnimalsCell MembraneDNA Transposable ElementsDrug Resistance, BacterialGenetic Complementation TestHydrogen-Ion ConcentrationInterferon-gammaLysosomesMacrophage ActivationMacrophagesMiceMice, Inbred C57BLMutagenesisMutationMycobacterium tuberculosisDNA Transposable ElementsInterferon-gamma

Identifiers

PMID18641659
PMCPMC2538620
OpenAlexW1966448483

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.