Evidence map›Paper›PMID 18632798›Full record

ArticleAmerican journal of physiology. Renal physiology2008

Dysregulated human renin expression in transgenic mice carrying truncated genomic constructs: evidence supporting the presence of insulators at the renin locus.

Xiyou Zhou, Eric T Weatherford, Xuebo Liu, Ella Born, Henry L Keen, Curt D Sigmund

Abstract read
In one paragraph

Article in American journal of physiology. Renal physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xiyou ZhouMolecular and Cellular Graduate Program, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, IA 52242, USA.
Eric T Weatherford
Xuebo Liu
Ella Born
Henry L Keen
Curt D Sigmund
University of Iowa · US

Funding

Role of the brain Renin-Angiotensin Sys. in Cardiovas and Metabolic RegulationP01HL084207 · NHLBI · UNIVERSITY OF IOWA · PI SIGMUND, CURT DANIEL · 2007 to 2022
$30.2M
Sympathetic and vascular control in genetic obesityP50HL055006 · NHLBI · UNIVERSITY OF IOWA · PI STOKES, JOHN B · 1996 to 2005
$12.5M
SIGNIFICANCE OF ANGIOTENSINOGEN VARIANTS IN HYPERTENSIONR01HL061446 · NHLBI · UNIVERSITY OF IOWA · PI SIGMUND, CURT DANIEL · 1999 to 2013
$4.8M
Role of Enhancers Regulating Renin Gene ExpressionR37HL048058 · NHLBI · UNIVERSITY OF IOWA · PI SIGMUND, CURT DANIEL · 2006 to 2015
$4.3M
TRANSGENIC STUDIES OF THE HUMAN RENIN-ANGIOTENSIN SYSTEMR01HL048058 · NHLBI · UNIVERSITY OF IOWA · PI SIGMUND, CURT DANIEL · 1993 to 2004
$1.8M
NHLBI NIH HHS HL 48058NHLBI NIH HHS HL 55006NHLBI NIH HHS HL 61446NHLBI NIH HHS P01 HL084207NHLBI NIH HHS P50 HL055006NHLBI NIH HHS R01 HL048058NHLBI NIH HHS R01 HL061446NHLBI NIH HHS R37 HL048058
6 · The paper itself

Abstract

We previously generated transgenic mice carrying a large P1 artificial chromosome (PAC160) encompassing a 160-kb segment containing the human renin gene, two upstream genes, and one downstream gene. We also previously generated mutant PAC160 constructs lacking the distal enhancer and concluded it is required to maintain baseline expression of human renin, but is not required for tissue-specific, cell-specific, and regulated expression of renin in vivo. We now report two additional transgenic lines carrying random truncations of PAC160 upstream of the renin gene. Southern and PCR mapping studies indicate that the truncation break points in the two lines are located approximately 10.4 and 2.5 kb upstream of the renin gene causing a deletion of all DNA upstream of the break. We tested the hypothesis that large-scale deletion of DNA upstream of the human renin gene including the enhancer would cause dysregulation of human renin expression. Phenotypically, these truncations cause a severe dysregulation of human renin expression, but remarkably, a preservation of the normal tissue-specific expression of the human ethanolamine kinase 2 (ETNK2) gene which lies immediately downstream of renin. Several functional binding sites for CTCF, a mammalian insulator protein, were identified in and around the renin and ETNK2 loci by gel shift and chromatin immunoprecipitation. We conclude that there are sequences in and around the renin and ETNK2 loci which act as boundaries between neighboring genes which insulate them from each other. The study illustrates the value of taking a much wider genomic perspective when studying mechanisms regulating gene expression.

Indexed as

Enhancer Elements, GeneticGene Expression RegulationInsulator ElementsAnimalsBase SequenceBinding SitesCCCTC-Binding FactorChromosomes, Artificial, P1 BacteriophageDNA-Binding ProteinsGenomicsHumansKisspeptinsMiceMice, TransgenicMolecular Sequence DataPhosphotransferases (Alcohol Group Acceptor)CCCTC-Binding FactorCTCF protein, humanCtcf protein, mouseDNA-Binding Proteinsethanolamine kinaseGOLT1A protein, humanKISS1 protein, humanKisspeptinsPhosphotransferases (Alcohol Group Acceptor)ReninRepressor ProteinsTumor Suppressor ProteinsVesicular Transport Proteins

Identifiers

PMID18632798
PMCPMC2536869
OpenAlexW2108257478

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.