Evidence map›Paper›PMID 18632581›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis.

Bin Yu, Liu Bi, Binglian Zheng, Lijuan Ji, David Chevalier, Manu Agarwal, Vanitharani Ramachandran, Wanxiang Li, Thierry Lagrange, John C Walker and 1 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 150 papers.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed
23.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 297 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Artificial miRNAs and target-mimics as potential tools for crop improvement.Physiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Review
  6. Article
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  8. Article
  9. Article
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  12. Biogenesis, Mode of Action and the Interactions of Plant Non-Coding RNAs.International journal of molecular sciences · 2023
    Review
  13. Review
  14. Article
  15. Review
  16. microRNA production inFrontiers in plant science · 2023
    Review
  17. Article
  18. Article
  19. Review
  20. Review

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Bin YuDepartment of Botany and Plant Sciences, Institute of Integrative Genome Biology, University of California, Riverside, CA 92521, USA.
Liu Bi
Binglian Zheng
Lijuan Ji
David Chevalier
Manu Agarwal
Vanitharani Ramachandran
Wanxiang Li
Thierry Lagrange
John C Walker
Xuemei Chen
University of California, Riverside · USUniversity of Missouri · USEnergy and Resources Institute · INUniversité de Perpignan · FR

Funding

Regulation of APETALA2 in flower development in ArabidopsisR01GM061146 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI CHEN, MENG · 2000 to 2022
$6.5M
NIGMS NIH HHS GM61146NIGMS NIH HHS R01 GM061146
6 · The paper itself

Abstract

Proteins containing the forkhead-associated domain (FHA) are known to act in biological processes such as DNA damage repair, protein degradation, and signal transduction. Here we report that DAWDLE (DDL), an FHA domain-containing protein in Arabidopsis, acts in the biogenesis of miRNAs and endogenous siRNAs. Unlike mutants of genes known to participate in the processing of miRNA precursors, such as dcl1, hyponastic leaves1, and serrate, ddl mutants show reduced levels of pri-miRNAs as well as mature miRNAs. Promoter activity of MIR genes, however, is not affected by ddl mutations. DDL is an RNA binding protein and is able to interact with DCL1. In addition, we found that SNIP1, the human homolog of DDL, is involved in miRNA biogenesis and interacts with Drosha. Therefore, we uncovered an evolutionarily conserved factor in miRNA biogenesis. We propose that DDL participates in miRNA biogenesis by facilitating DCL1 to access or recognize pri-miRNAs.

Indexed as

ArabidopsisArabidopsis ProteinsCarrier ProteinsCell Cycle ProteinsGenes, PlantGenes, ReporterHeLa CellsHumansIntracellular Signaling Peptides and ProteinsMicroRNAsModels, BiologicalMutationNicotianaPlants, Genetically ModifiedRibonuclease IIIRNA-Binding ProteinsArabidopsis ProteinsCarrier ProteinsCell Cycle ProteinsDAWDLE protein, ArabidopsisDCL1 protein, ArabidopsisDROSHA protein, humanIntracellular Signaling Peptides and ProteinsMicroRNAsRibonuclease IIIRNA-Binding ProteinsRNA, PlantSNIP1 protein, human

Identifiers

PMID18632581
PMCPMC2481372
OpenAlexW2072017031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.