ArticleComparative and functional genomics2005
Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages.
Article in Comparative and functional genomics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 63 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
63 citing papers in PubMed.
- Chemical Ontogeny in Plants: Developmental Dynamics of Specialized Metabolism and Implications for Ecology, Quality Control, and Bioprospecting.Plants (Basel, Switzerland) · 2026Review
- Genome-phenome association prediction using weighted deep matrix factorization with a multisource graph attention network.Quantitative biology (Beijing, China) · 2026Article
- Integrating scanned literature and online sources to build a data text collection for plant biodiversity.Biodiversity data journal · 2026Article
- Exploring Saccharomycotina Yeast Ecology Through an Ecological Ontology Framework.Yeast (Chichester, England) · 2024Review
- Toward a data infrastructure for the Plant Cell Atlas.Plant physiology · 2023Review
- Sainfoin (Frontiers in plant science · 2023Article
- C3PO: a crop planning and production process ontology and knowledge graph.Frontiers in artificial intelligence · 2023Article
- Review
- Genetic and Genomic Resources for Soybean Breeding Research.Plants (Basel, Switzerland) · 2022Review
- Opportunities and limits of controlled-environment plant phenotyping for climate response traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Review
- Genetic Diversity of Transcription Factor Genes inFrontiers in plant science · 2022Article
- A COMPASS for VESPUCCI: A FAIR Way to Explore the Grapevine Transcriptomic Landscape.Frontiers in plant science · 2022Article
- Challenges for FAIR-compliant description and comparison of crop phenotype data with standardized controlled vocabularies.Database : the journal of biological databases and curation · 2021Article
- GMO Genetic Elements Thesaurus (GMO-GET): a controlled vocabulary for the consensus designation of introduced or modified genetic elements in genetically modified organisms.BMC bioinformatics · 2021Article
- Towards semantic interoperability: finding and repairing hidden contradictions in biomedical ontologies.BMC medical informatics and decision making · 2020Article
- Enabling reusability of plant phenomic datasets with MIAPPE 1.1.The New phytologist · 2020Article
- Formal axioms in biomedical ontologies improve analysis and interpretation of associated data.Bioinformatics (Oxford, England) · 2020Article
- Trait ontology analysis based on association mapping studies bridges the gap between crop genomics and Phenomics.BMC genomics · 2019Article
- Fruit Salad in the Lab: Comparing Botanical Species to Help Deciphering Fruit Primary Metabolism.Frontiers in plant science · 2019Review
- Cyberinfrastructure to Improve Forest Health and Productivity: The Role of Tree Databases in Connecting Genomes, Phenomes, and the Environment.Frontiers in plant science · 2019Article
3 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
15 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Plant Ontology Consortium (POC) (www.plantontology.org) is a collaborative effort among several plant databases and experts in plant systematics, botany and genomics. A primary goal of the POC is to develop simple yet robust and extensible controlled vocabularies that accurately reflect the biology of plant structures and developmental stages. These provide a network of vocabularies linked by relationships (ontology) to facilitate queries that cut across datasets within a database or between multiple databases. The current version of the ontology integrates diverse vocabularies used to describe Arabidopsis, maize and rice (Oryza sp.) anatomy, morphology and growth stages. Using the ontology browser, over 3500 gene annotations from three species-specific databases, The Arabidopsis Information Resource (TAIR) for Arabidopsis, Gramene for rice and MaizeGDB for maize, can now be queried and retrieved.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.