Evidence map›Paper›PMID 18628957›Full record

ArticlePloS one2008

The protein phosphatase 7 regulates phytochrome signaling in Arabidopsis.

Thierry Genoud, Marcela Treviño Santa Cruz, Tea Kulisic, Francesca Sparla, Christian Fankhauser, Jean-Pierre Métraux

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
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  4. International journal of molecular sciences · 2021
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  10. A reverse genetics approach identifies novel mutants in light responses and anthocyanin metabolism in petunia.Physiology and molecular biology of plants : an international journal of functional plant biology · 2014
    Article
  11. Article
  12. Article
  13. Article
  14. PPEF/PP7 protein Ser/Thr phosphatases.Cellular and molecular life sciences : CMLS · 2009
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 4 countries.

Thierry GenoudCenter of Integrative Genomics, University of Lausanne, Lausanne, Switzerland. thierry.genoud@unil.ch
Marcela Treviño Santa Cruz
Tea Kulisic
Francesca Sparla
Christian Fankhauser
Jean-Pierre Métraux
University of Lausanne · CHFlorida Gulf Coast University · USUniversity of Bologna · ITUniversity of Fribourg · CHUniversity of Split · HR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The psi2 mutant of Arabidopsis displays amplification of the responses controlled by the red/far red light photoreceptors phytochrome A (phyA) and phytochrome B (phyB) but no apparent defect in blue light perception. We found that loss-of-function alleles of the protein phosphatase 7 (AtPP7) are responsible for the light hypersensitivity in psi2 demonstrating that AtPP7 controls the levels of phytochrome signaling. Plants expressing reduced levels of AtPP7 mRNA display reduced blue-light induced cryptochrome signaling but no noticeable deficiency in phytochrome signaling. Our genetic analysis suggests that phytochrome signaling is enhanced in the AtPP7 loss of function alleles, including in blue light, which masks the reduced cryptochrome signaling. AtPP7 has been found to interact both in yeast and in planta assays with nucleotide-diphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signals. Analysis of ndpk2-psi2 double mutants suggests that NDPK2 plays a critical role in the AtPP7 regulation of the phytochrome pathway and identifies NDPK2 as an upstream element involved in the modulation of the salicylic acid (SA)-dependent defense pathway by light. Thus, cryptochrome- and phytochrome-specific light signals synchronously control their relative contribution to the regulation of plant development. Interestingly, PP7 and NDPK are also components of animal light signaling systems.

Indexed as

Gene Expression Regulation, PlantAllelesArabidopsisCloning, MolecularDNA, ComplementaryEpistasis, GeneticGenetic Complementation TestLightModels, BiologicalMutationNucleoside-Diphosphate KinasePhosphoprotein PhosphatasesPhytochromeSalicylic AcidSignal TransductionDNA, ComplementaryNucleoside-Diphosphate Kinasenucleoside diphosphate kinase 2Phosphoprotein PhosphatasesPhytochromeSalicylic Acid

Identifiers

PMID18628957
PMCPMC2444027
OpenAlexW1975875087

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.