Evidence map›Paper›PMID 18625848›Full record

ArticleGlycobiology2008

Lectin microarrays identify cell-specific and functionally significant cell surface glycan markers.

Sheng-Ce Tao, Yu Li, Jiangbing Zhou, Jiang Qian, Ronald L Schnaar, Ying Zhang, Irwin J Goldstein, Heng Zhu, Jonathan P Schneck

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 173 citations in OpenAlex.

  1. Article
  2. Spatial Glyco-Codes Define Human Liver Pathology and Progression.bioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Modulation ofFrontiers in cellular and infection microbiology · 2024
    Article
  5. Article
  6. Imaging ofScience advances · 2023
    Article
  7. Combined Lectin- and Immuno-histochemistry (CLIH) for Fluorescence Microscopy.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. The Role of Glycosylation in Infectious Diseases.Advances in experimental medicine and biology · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sheng-Ce TaoDepartment of Pharmacology and Molecular Sciences, Johns Hopkins University, Baltimore, MD 21205, USA.
Yu Li
Jiangbing Zhou
Jiang Qian
Ronald L Schnaar
Ying Zhang
Irwin J Goldstein
Heng Zhu
Jonathan P Schneck
Johns Hopkins University · USMolecular Sciences Institute · USUniversity of Michigan–Ann Arbor · US

Funding

TCP5: ACTIVE SITE LABELING REAGENT FOR ACETYLTRANSFERASESU54RR020839 · NCRR · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 2004 to 2011
$27.4M
CELLULAR &MOLECULAR MECH OF INFLAMMATORY REACTIONST32AI007247 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Joel L Pomerantz · 1985 to 2026
$10.2M
Use of aAPC for Melanoma Adoptive ImmunotherapyR01CA108835 · NCI · JOHNS HOPKINS UNIVERSITY · PI SCHNECK, JONATHAN P · 2004 to 2015
$3.3M
ANTIGEN SPECIFIC MODULATION OF T CELL RESPONSESR01AI044129 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SCHNECK, JONATHAN P · 1999 to 2009
$3.0M
Complex Carbohydrates in Neuronal Cell FunctionR37NS037096 · NINDS · JOHNS HOPKINS UNIVERSITY · PI SCHNAAR, RONALD L · 2005 to 2011
$2.8M
MODE OF ACTION OF PYRAZINAMIDE IN TUBERCLE BACILLUSR01AI044063 · NIAID · JOHNS HOPKINS UNIVERSITY · PI ZHANG, YING · 1999 to 2009
$2.6M
IMMUNOREGULATORY FUNCTIONS OF TCR AND MHC COMPLEXESR01AI029575 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SCHNECK, JONATHAN P · 1991 to 2007
$2.1M
COMPLEX CARBOHYDRATES IN NEURONAL CELL FUNCTIONR01NS037096 · NINDS · JOHNS HOPKINS UNIVERSITY · PI SCHNAAR, RONALD L · 1997 to 2004
$1.9M
MECHANISM OF INSERTION SEQUENCE TRANSLOCATIONR01GM028470 · NIGMS · YALE UNIVERSITY · PI GRINDLEY, NIGEL DAVID · 1985 to 2005
$1.6M
Application of Bioinformatics to Retinal Gene RegulationR03EY015684 · NEI · JOHNS HOPKINS UNIVERSITY · PI QIAN, JIANG · 2004 to 2006
$487k
MECHANISM OF INSERTION SEQUENCE TRANSLOCATIONR37GM028470 · NIGMS · YALE UNIVERSITY · PI GRINDLEY, NIGEL D · 1991 to 2000
$453k
NCI NIH HHS CA108835NCRR NIH HHS U54RR020839-01NEI NIH HHS EY015684NIAID NIH HHS 5 T32AI07247-25NIAID NIH HHS AI29575NIAID NIH HHS AI44063NIAID NIH HHS AI44129NIGMS NIH HHS GM 28470NINDS NIH HHS NS037096
6 · The paper itself

Abstract

Glycosylation is among the most complex posttranslational modifications with an extremely high level of diversity that has made it refractory to high-throughput analyses. Despite its resistance to high-throughput techniques, glycosylation is important in many critical cellular processes that necessitate a productive approach to their analysis. To facilitate studies in glycosylation, we developed a high-throughput lectin microarray for defining mammalian cell surface glycan signatures. Using the lectin microarray we established a binary analysis of cell binding and hierarchical organization of 24 mammalian cell lines. The array was also used to document changes in cell surface glycosylation during cell development and differentiation of primary murine immune system cells. To establish the biological and clinical importance of glycan signatures, the lectin microarray was applied in two systems. First, we analyzed the cell surface glycan signatures and were able to predict mannose-dependent tropism using a model pathogen. Second, we used the glycan signatures to identify novel lectin biomarkers for cancer stem-like cells in a murine model. Thus, lectin microarrays are an effective tool for analyzing diverse cell processes including cell development and differentiation, cell-cell communication, pathogen-host recognition, and cell surface biomarker identification.

Indexed as

AnimalsBiomarkersCell DifferentiationCell LineCells, CulturedEscherichia coliHumansLectinsLymphocytesMiceMicroarray AnalysisPolysaccharidesProtein BindingBiomarkersLectinsPolysaccharides

Identifiers

PMID18625848
PMCPMC2733773
OpenAlexW2131946032

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.