Evidence map›Paper›PMID 18625744›Full record

ArticleThe Journal of experimental medicine2008

Transvection mediated by the translocated cyclin D1 locus in mantle cell lymphoma.

Hui Liu, Jing Huang, Jin Wang, Shuguang Jiang, Alexis S Bailey, Devorah C Goldman, Markus Welcker, Victoria Bedell, Marilyn L Slovak, Bruce Clurman and 3 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  15. Review
  16. Cell cyclins: triggering elements of cancer or not?World journal of surgical oncology · 2010
    Review
  17. Article
  18. Does CTCF mediate between nuclear organization and gene expression?BioEssays : news and reviews in molecular, cellular and developmental biology · 2010
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Hui LiuCenter for Hematologic Malignancies, Oregon Cancer Institute, Portland, OR 97239, USA.
Jing Huang
Jin Wang
Shuguang Jiang
Alexis S Bailey
Devorah C Goldman
Markus Welcker
Victoria Bedell
Marilyn L Slovak
Bruce Clurman
Mathew Thayer
William H Fleming
Elliot Epner
Oregon Health & Science University · USCity Of Hope National Medical Center · USFred Hutch Cancer Center · US

Funding

Stem Cell Plasticity of Adult Vascular TissueR01HL069133 · NHLBI · OREGON HEALTH & SCIENCE UNIVERSITY · PI FLEMING, WILLIAM H · 2001 to 2011
$2.8M
Endothelial Potential of Bone Marrow Derived ProgenitorsR01HL077818 · NHLBI · OREGON HEALTH & SCIENCE UNIVERSITY · PI FLEMING, WILLIAM H · 2005 to 2008
$1.2M
GENETIC ANALYSIS OF THE CHICKEN BETA-GLOBIN LOCUSR01DK056798 · NIDDK · UNIVERSITY OF ARIZONA · PI EPNER, ELLIOT M · 2000 to 2004
$992k
NHLBI NIH HHS HL069133NHLBI NIH HHS HL077818NHLBI NIH HHS R01 HL069133NHLBI NIH HHS R01 HL077818NIDDK NIH HHS DK56798NIDDK NIH HHS R01 DK056798
6 · The paper itself

Abstract

In mantle cell lymphoma (MCL) and some cases of multiple myeloma (MM), cyclin D1 expression is deregulated by chromosome translocations involving the immunoglobulin heavy chain (IgH) locus. To evaluate the mechanisms responsible, gene targeting was used to study long-distance gene regulation. Remarkably, these targeted cell lines lost the translocated chromosome (t(11;14)). In these MCL and MM cells, the nonrearranged cyclin D1 (CCND1) locus reverts from CpG hypomethylated to hypermethylated. Reintroduction of the translocated chromosome induced a loss of methylation at the unrearranged CCND1 locus, providing evidence of a transallelic regulatory effect. In these cell lines and primary MCL patient samples, the CCND1 loci are packaged in chromatin-containing CCCTC binding factor (CTCF) and nucleophosmin (NPM) at the nucleolus. We show that CTCF and NPM are bound at the IgH 3' regulatory elements only in the t(11;14) MCL cell lines. Furthermore, NPM short hairpin RNA produces a specific growth arrest in these cells. Our data demonstrate transvection in human cancer and suggest a functional role for CTCF and NPM.

Indexed as

Genes, bcl-1Translocation, GeneticCCCTC-Binding FactorCell Line, TumorChromosomes, Human, Pair 11Chromosomes, Human, Pair 14CpG IslandsCyclin DCyclinsDNA-Binding ProteinsDNA MethylationGene Expression Regulation, NeoplasticGenes, ImmunoglobulinGene TargetingHumansHybrid CellsCCCTC-Binding FactorCTCF protein, humanCyclin DCyclinsDNA-Binding ProteinsNPM1 protein, humanNuclear ProteinsNucleophosminRepressor Proteins

Identifiers

PMID18625744
PMCPMC2525596
OpenAlexW2162801478

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.