Evidence map›Paper›PMID 18625715›Full record

ArticleThe Journal of biological chemistry2008

Importance of the cyanobacterial Gun4 protein for chlorophyll metabolism and assembly of photosynthetic complexes.

Roman Sobotka, Ulf Dühring, Josef Komenda, Enrico Peter, Zdenko Gardian, Martin Tichy, Bernhard Grimm, Annegret Wilde

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Structural basis of bilin binding by the chlorophyll biosynthesis regulator GUN4.Protein science : a publication of the Protein Society · 2021
    Article
  7. Bilin-dependent regulation of chlorophyll biosynthesis by GUN4.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Evolution of Ycf54-independent chlorophyll biosynthesis in cyanobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  9. Mutations of theFrontiers in plant science · 2021
    Article
  10. Article
  11. Article
  12. Review
  13. A Suppressor Mutation Partially Reverts theFrontiers in plant science · 2019
    Article
  14. TheFrontiers in plant science · 2017
    Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Roman SobotkaInstitute of Physical Biology, University of South Bohemia, 37333 Nove Hrady, Czech Republic.
Ulf Dühring
Josef Komenda
Enrico Peter
Zdenko Gardian
Martin Tichy
Bernhard Grimm
Annegret Wilde
Humboldt-Universität zu Berlin · DECzech Academy of Sciences, Institute of Microbiology · CZInstitute of Plant Molecular Biology · CZUniversity of South Bohemia in České Budějovice · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gun4 is a porphyrin-binding protein that activates magnesium chelatase, a multimeric enzyme catalyzing the first committed step in chlorophyll biosynthesis. In plants, GUN4 has been implicated in plastid-to-nucleus retrograde signaling processes that coordinate both photosystem II and photosystem I nuclear gene expression with chloroplast function. In this work we present the functional analysis of Gun4 from the cyanobacterium Synechocystis sp. PCC 6803. Affinity co-purification of the FLAG-tagged Gun4 with the ChlH subunit of the magnesium chelatase confirmed the association of Gun4 with the enzyme in cyanobacteria. Inactivation of the gun4 gene abolished photoautotrophic growth of the resulting gun4 mutant strain that exhibited a decreased activity of magnesium chelatase. Consequently, the cellular content of chlorophyll-binding proteins was highly inadequate, especially that of proteins of photosystem II. Immunoblot analyses, blue native polyacrylamide gel electrophoresis, and radiolabeling of the membrane protein complexes suggested that the availability of the photosystem II antenna protein CP47 is a limiting factor for the photosystem II assembly in the gun4 mutant.

Indexed as

Carrier ProteinsCell MembraneChlorophyllChloroplastsCyanobacteriaIntracellular Signaling Peptides and ProteinsLight-Harvesting Protein ComplexesLyasesMicroscopy, ElectronMicroscopy, Electron, TransmissionMutationPhenotypePhotosynthesisPhotosynthetic Reaction Center Complex ProteinsPhotosystem II Protein ComplexPorphyrinsCarrier ProteinsChlorophyllIntracellular Signaling Peptides and ProteinsLight-Harvesting Protein ComplexesLyasesmagnesium chelatasePhotosynthetic Reaction Center Complex Proteinsphotosystem II, chlorophyll-binding protein, CP-47Photosystem II Protein ComplexPorphyrins

Identifiers

PMID18625715
PMCPMC3258849
OpenAlexW1981187741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.