Evidence map›Paper›PMID 18621967›Full record

ArticleAnnals of botany2008

Detailed analysis of the expression of an alpha-gliadin promoter and the deposition of alpha-gliadin protein during wheat grain development.

T W J M Van Herpen, M Riley, C Sparks, H D Jones, C Gritsch, E H Dekking, R J Hamer, D Bosch, E M J Salentijn, M J M Smulders and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

T W J M Van HerpenPlant Research International, Wageningen UR, P.O. Box 16, NL-6700 AA Wageningen, The Netherlands.
M Riley
C Sparks
H D Jones
C Gritsch
E H Dekking
R J Hamer
D Bosch
E M J Salentijn
M J M Smulders
P R Shewry
L J W J Gilissen
Rothamsted Research · GBResearch International (United States) · USWageningen University & Research · NLLeiden University Medical Center · NL

Funding

Biotechnology and Biological Sciences Research Council BBS/E/C/00004158Biotechnology and Biological Sciences Research Council BBS/E/C/00004953Biotechnology and Biological Sciences Research Council BBS/E/C/00004975
6 · The paper itself

Abstract

BACKGROUND AND

aimsAlpha-gliadin proteins are important for the industrial quality of bread wheat flour, but they also contain many epitopes that can trigger celiac (coeliac) disease (CD). The B-genome-encoded alpha-gliadin genes, however, contain very few epitopes. Controlling alpha-gliadin gene expression in wheat requires knowledge on the processes of expression and deposition of alpha-gliadin protein during wheat grain development.

methodsA 592-bp fragment of the promotor of a B-genome-encoded alpha-gliadin gene driving the expression of a GUS reporter gene was transformed into wheat. A large number of transgenic lines were used for data collection. GUS staining was used to determine GUS expression during wheat kernel development, and immunogold labelling and tissue printing followed by staining with an alpha-gliadin-specific antibody was used to detect alpha-gliadin protein deposited in developing wheat kernels. The promoter sequence was screened for regulatory motifs and compared to other available alpha-gliadin promoter sequences. KEY

resultsGUS expression was detected primarily in the cells of the starchy endosperm, notably in the subaleurone layer but also in the aleurone layer. The alpha-gliadin promoter was active from 11 days after anthesis (DAA) until maturity, with an expression similar to that of a 326-bp low molecular weight (LMW) subunit gene promoter reported previously. An alpha-gliadin-specific antibody detected alpha-gliadin protein in protein bodies in the starchy endosperm and in the subaleurone layer but, in contrast to the promoter activity, no alpha-gliadin was detected in the aleurone cell layer. Sequence comparison showed differences in regulatory elements between the promoters of alpha-gliadin genes originating from different genomes (A and B) of bread wheat both in the region used here and upstream.

conclusionsThe results suggest that additional regulator elements upstream of the promoter region used may specifically repress expression in the aleurone cell layer. Observed differences in expression regulator motifs between the alpha-gliadin genes on the different genomes (A and B) of bread wheat leads to a better understanding how alpha-gliadin expression can be controlled.

Indexed as

Gene Expression Regulation, PlantPromoter Regions, GeneticEpitopesGenes, ReporterGliadinGlucuronidasePhenotypePlant ProteinsPlants, Genetically ModifiedTriticumEpitopesGliadinGlucuronidasePlant Proteins

Identifiers

PMID18621967
PMCPMC2701793
OpenAlexW2152140553

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.