Evidence map›Paper›PMID 18621913›Full record

ArticleProtein science : a publication of the Protein Society2008

The novel p53 isoform "delta p53" is a misfolded protein and does not bind the p21 promoter site.

Maria M García-Alai, Henning Tidow, Eviatar Natan, Fiona M Townsley, Dmitry B Veprintsev, Alan R Fersht

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. How p53 Molecules Solve the Target DNA Search Problem: A Review.International journal of molecular sciences · 2020
    Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Maria M García-AlaiMedical Research Council Centre for Protein Engineering, Cambridge CB2 0QH, United Kingdom.
Henning Tidow
Eviatar Natan
Fiona M Townsley
Dmitry B Veprintsev
Alan R Fersht

Funding

Medical Research Council MC_U105474168
6 · The paper itself

Abstract

The tumor suppressor p53 can be expressed as different isoforms because of promoter selection and mRNA editing. One isoform, "delta p53" (Delta p53), results from what would be an unusual alternative splicing of exons 7/8 of the p53 gene, conserving the reading frame and generating a novel protein with proposed transcriptional activity essential for the intra S-phase checkpoint. Here, we show that the deletion of the 66 residues that correspond to strand beta10 and the C-terminal helix of the core domain and the interconnecting linker to the tetramerization domain occurring in the Delta p53 isoform leads to a misfolded and unstable protein, prone to form soluble aggregates, which does not bind the p21 promoter site. The complex of coexpressed Delta p53 and flp53 is soluble in vitro and binds poorly to DNA. Our results provide a structural explanation for the dominant-negative effect of Delta p53 and its lack of transcriptional activity.

Indexed as

Transcription, GeneticAlternative SplicingCell LineCyclin-Dependent Kinase Inhibitor p21HumansPromoter Regions, GeneticProtein BindingProtein FoldingProtein IsoformsProtein Structure, SecondarySequence DeletionTumor Suppressor Protein p53CDKN1A protein, humanCyclin-Dependent Kinase Inhibitor p21Protein IsoformsTumor Suppressor Protein p53

Identifiers

PMID18621913
PMCPMC2548360

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.