Evidence map›Paper›PMID 18621865›Full record

ArticleApplied and environmental microbiology2008

Real-time PCR detection of pathogenic microorganisms in roof-harvested rainwater in Southeast Queensland, Australia.

W Ahmed, F Huygens, A Goonetilleke, T Gardner

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
12.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 185 citations in OpenAlex.

  1. Article
  2. Insects · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Detection ofMicroorganisms · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Quantitative LAMP and PCR Detection ofInternational journal of food science · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Abundance of Naegleria fowleri in roof-harvested rainwater tank samples from two continents.Environmental science and pollution research international · 2018
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

W AhmedDepartment of Natural Resources and Water, 80 Meiers Road, Indooroopilly, Brisbane 4068, Australia. shuhat@yahoo.com
F Huygens
A Goonetilleke
T Gardner
Queensland University of Technology · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, the microbiological quality of roof-harvested rainwater was assessed by monitoring the concentrations of Escherichia coli, enterococci, Clostridium perfringens, and Bacteroides spp. in rainwater obtained from tanks in Southeast Queensland, Australia. Samples were also tested using real-time PCR (with SYBR Green I dye) for the presence of potential pathogenic microorganisms. Of the 27 rainwater samples tested, 17 (63%), 21 (78%), 13 (48%), and 24 (89%) were positive for E. coli, enterococci, C. perfringens, and Bacteroides spp., respectively. Of the 27 samples, 11 (41%), 7 (26%), 4 (15%), 3 (11%), and 1 (4%) were PCR positive for the Campylobacter coli ceuE gene, the Legionella pneumophila mip gene, the Aeromonas hydrophila lip gene, the Salmonella invA gene, and the Campylobacter jejuni mapA gene. Of the 21 samples tested, 4 (19%) were positive for the Giardia lamblia beta-giardin gene. The binary logistic regression model indicated a positive correlation (P < 0.02) between the presence/absence of enterococci and A. hydrophila. In contrast, the presence/absence of the remaining potential pathogens did not correlate with traditional fecal indicators. The poor correlation between fecal indicators and potential pathogens suggested that fecal indicators may not be adequate to assess the microbiological quality of rainwater and consequent health risk.

Indexed as

Polymerase Chain ReactionWater MicrobiologyBacteriaBenzothiazolesColony Count, MicrobialDiaminesDNA, BacterialEnvironmental MonitoringFecesLogistic ModelsOrganic ChemicalsPrevalenceQueenslandQuinolinesRainRiskBenzothiazolesDiaminesDNA, BacterialOrganic ChemicalsQuinolinesSYBR Green IWater Pollutants

Identifiers

PMID18621865
PMCPMC2546628
OpenAlexW2140003658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.